RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 CD5P06127 495 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 S100GP29377 79 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 PRSS3P35030 304 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 HRH1P35367 487 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 PRCDQ00LT1 54 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 H2BFWTQ7Z2G1 175 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 SAMD12Q8N8I0 201 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 GINS3Q9BRX5 216 aa17.39■□□□□ 0.37
CPSF1-214ENST00000622776 DEFB4AO15263 64 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 EIF4EP06730 217 aaKnown RBP17.38■□□□□ 0.37
CPSF1-214ENST00000622776 HLA-DMAP28067 261 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 TGFBR1P36897 503 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 LPCAT3Q6P1A2 487 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 TOMM20LQ6UXN7 152 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 TBC1D26Q86UD7 250 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 ST8SIA2Q92186 375 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 PINX1Q96BK5 328 aaKnown RBP17.38■□□□□ 0.37
CPSF1-214ENST00000622776 VSIRQ9H7M9 311 aa17.38■□□□□ 0.37
CPSF1-214ENST00000622776 ST8SIA3O43173 380 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 IGKV1-39P01597 117 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 IGKV1D-39P04432 117 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 HSPE1P61604 102 aaKnown RBP17.37■□□□□ 0.37
CPSF1-214ENST00000622776 PRR20EP86478 221 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 PRR20CP86479 221 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 PRR20DP86480 221 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 PRR20BP86481 221 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 PRR20AP86496 221 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 TMEM187Q14656 261 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 LILRB2Q8N423 598 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 C2CD4CQ8TF44 421 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 HECTD4Q9Y4D8 3996 aa17.37■□□□□ 0.37
CPSF1-214ENST00000622776 DNASE2O00115 360 aaPredicted RBP17.36■□□□□ 0.37
CPSF1-214ENST00000622776 DFFBO76075 338 aa17.36■□□□□ 0.37
CPSF1-214ENST00000622776 APOHP02749 345 aaPredicted RBP17.36■□□□□ 0.37
CPSF1-214ENST00000622776 RPS19P39019 145 aaKnown RBP17.36■□□□□ 0.37
CPSF1-214ENST00000622776 DEFB131AP59861 70 aa17.36■□□□□ 0.37
CPSF1-214ENST00000622776 TSPAN5P62079 268 aa17.36■□□□□ 0.37
CPSF1-214ENST00000622776 ERHP84090 104 aaKnown RBP17.36■□□□□ 0.37
CPSF1-214ENST00000622776 MS4A6AQ9H2W1 248 aa17.36■□□□□ 0.37
CPSF1-214ENST00000622776 AGRNO00468 2067 aa17.36■□□□□ 0.37
CPSF1-214ENST00000622776 ATP6V1G2O95670 118 aa17.35■□□□□ 0.37
CPSF1-214ENST00000622776 NPBWR1P48145 328 aa17.35■□□□□ 0.37
CPSF1-214ENST00000622776 TCTAP57738 103 aa17.35■□□□□ 0.37
CPSF1-214ENST00000622776 LEMD1Q68G75 181 aa17.35■□□□□ 0.37
CPSF1-214ENST00000622776 MRGPRFQ96AM1 343 aa17.35■□□□□ 0.37
CPSF1-214ENST00000622776 TRAV2A0A0B4J234 112 aa17.34■□□□□ 0.37
CPSF1-214ENST00000622776 IGHV3-66A0A0C4DH42 116 aa17.34■□□□□ 0.37
CPSF1-214ENST00000622776 ZNF600Q6ZNG1 722 aa17.34■□□□□ 0.37
CPSF1-214ENST00000622776 DUSP18Q8NEJ0 188 aa17.34■□□□□ 0.37
CPSF1-214ENST00000622776 GPX8Q8TED1 209 aa17.34■□□□□ 0.37
CPSF1-214ENST00000622776 PUS1Q9Y606 427 aaKnown RBP eCLIP17.34■□□□□ 0.37
CPSF1-214ENST00000622776 RPL11P62913 178 aaKnown RBP17.33■□□□□ 0.36
CPSF1-214ENST00000622776 SPINK9Q5DT21 86 aa17.33■□□□□ 0.36
CPSF1-214ENST00000622776 FAM24BQ8N5W8 94 aa17.33■□□□□ 0.36
CPSF1-214ENST00000622776 ZFAND3Q9H8U3 227 aa17.33■□□□□ 0.36
CPSF1-214ENST00000622776 UCP3P55916 312 aa17.32■□□□□ 0.36
CPSF1-214ENST00000622776 IZUMO4Q1ZYL8 232 aa17.32■□□□□ 0.36
CPSF1-214ENST00000622776 APLNQ9ULZ1 77 aa17.32■□□□□ 0.36
CPSF1-214ENST00000622776 TMEM50AO95807 157 aa17.31■□□□□ 0.36
CPSF1-214ENST00000622776 KCTD21Q4G0X4 260 aa17.31■□□□□ 0.36
CPSF1-214ENST00000622776 STHQ8IWL8 128 aa17.31■□□□□ 0.36
CPSF1-214ENST00000622776 Q8NAQ8 132 aa17.31■□□□□ 0.36
CPSF1-214ENST00000622776 TMEM231Q9H6L2 316 aa17.31■□□□□ 0.36
CPSF1-214ENST00000622776 RABAC1Q9UI14 185 aa17.31■□□□□ 0.36
CPSF1-214ENST00000622776 A0A1B0GU03 582 aa17.3■□□□□ 0.36
CPSF1-214ENST00000622776 IGLL5B9A064 214 aa17.3■□□□□ 0.36
CPSF1-214ENST00000622776 SNCAP37840 140 aa17.3■□□□□ 0.36
CPSF1-214ENST00000622776 LSM3P62310 102 aaKnown RBP17.3■□□□□ 0.36
CPSF1-214ENST00000622776 HRH4Q9H3N8 390 aa17.3■□□□□ 0.36
CPSF1-214ENST00000622776 SCPEP1Q9HB40 452 aa17.3■□□□□ 0.36
CPSF1-214ENST00000622776 C11orf94C9JXX5 98 aa17.29■□□□□ 0.36
CPSF1-214ENST00000622776 GIG44P09565 113 aaPredicted RBP17.29■□□□□ 0.36
CPSF1-214ENST00000622776 INS-IGF2F8WCM5 200 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 RBMY1A1P0DJD3 496 aaKnown RBP17.28■□□□□ 0.36
CPSF1-214ENST00000622776 RBMY1CP0DJD4 496 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 NPPCP23582 126 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 RCVRNP35243 200 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 RBMY1FQ15415 496 aaKnown RBP17.28■□□□□ 0.36
CPSF1-214ENST00000622776 PVRIGQ6DKI7 326 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 SNX29P2Q8IUI4 249 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 SLC35G3Q8N808 338 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 YIPF6Q96EC8 236 aa17.28■□□□□ 0.36
CPSF1-214ENST00000622776 A0A0B4J293 547 aa17.27■□□□□ 0.36
CPSF1-214ENST00000622776 IGHV4-28A0A0C4DH34 117 aa17.27■□□□□ 0.36
CPSF1-214ENST00000622776 SMIM31A0A1B0GVY4 71 aa17.27■□□□□ 0.36
CPSF1-214ENST00000622776 A0A1W2PS18 150 aa17.27■□□□□ 0.36
CPSF1-214ENST00000622776 IGKV1-5P01602 117 aa17.27■□□□□ 0.36
CPSF1-214ENST00000622776 TRPT1Q86TN4 253 aaKnown RBP17.27■□□□□ 0.36
CPSF1-214ENST00000622776 COMMD3Q9UBI1 195 aa17.27■□□□□ 0.36
CPSF1-214ENST00000622776 K7EQG2 157 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 IFNA17P01571 189 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 APOA1P02647 267 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 P0C879 139 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 RNASE2P10153 161 aaKnown RBP17.26■□□□□ 0.35
CPSF1-214ENST00000622776 RND3P61587 244 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 TMEM41BQ5BJD5 291 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 STXBP6Q8NFX7 210 aa17.26■□□□□ 0.35
CPSF1-214ENST00000622776 M0QYG6 137 aa17.25■□□□□ 0.35
CPSF1-214ENST00000622776 CORTO00230 105 aa17.25■□□□□ 0.35
CPSF1-214ENST00000622776 MIFP14174 115 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms