RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 IFT46Q9NQC8 304 aa7.98□□□□□ -1.13
LINC00963-214ENST00000622680 TMEM14BQ9NUH8 114 aa7.98□□□□□ -1.13
LINC00963-214ENST00000622680 TRAV14DV4A0A0A6YYC5 116 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 I3L2K1 104 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 SNAPC5O75971 98 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 PMP2P02689 132 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 DEFB131AP59861 70 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 CLVS1Q8IUQ0 354 aaPredicted RBP7.97□□□□□ -1.13
LINC00963-214ENST00000622680 LILRB2Q8N423 598 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 OR1P1Q8NH06 330 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 PINX1Q96BK5 328 aaKnown RBP7.97□□□□□ -1.13
LINC00963-214ENST00000622680 MOB3AQ96BX8 217 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 DGCR14Q96DF8 476 aaKnown RBP7.97□□□□□ -1.13
LINC00963-214ENST00000622680 TMEM56Q96MV1 263 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 CMTM3Q96MX0 182 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 NXF2Q9GZY0 626 aaKnown RBP7.97□□□□□ -1.13
LINC00963-214ENST00000622680 MS4A6AQ9H2W1 248 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 PRNDQ9UKY0 176 aa7.97□□□□□ -1.13
LINC00963-214ENST00000622680 IGHV4-28A0A0C4DH34 117 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 ST8SIA3O43173 380 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 GNG7O60262 68 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 DFFBO76075 338 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 MT-CO2P00403 227 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 EIF4EP06730 217 aaKnown RBP7.96□□□□□ -1.14
LINC00963-214ENST00000622680 RBMY1A1P0DJD3 496 aaKnown RBP7.96□□□□□ -1.14
LINC00963-214ENST00000622680 RBMY1CP0DJD4 496 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 C4BPBP20851 252 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 CBX5P45973 191 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 MFAP4P55083 255 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 SCAND1P57086 179 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 RBMY1FQ15415 496 aaKnown RBP7.96□□□□□ -1.14
LINC00963-214ENST00000622680 PHLDA2Q53GA4 152 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 SPINK9Q5DT21 86 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 Q6ZTC4 211 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 BORCS5Q969J3 196 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 NAA50Q9GZZ1 169 aaKnown RBP7.96□□□□□ -1.14
LINC00963-214ENST00000622680 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 DIABLOQ9NR28 239 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 RABAC1Q9UI14 185 aa7.96□□□□□ -1.14
LINC00963-214ENST00000622680 IGHV4-4A0A075B6R2 117 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 A0A0A6YYH2 397 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 A6NJ64 397 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 DNASE2O00115 360 aaPredicted RBP7.95□□□□□ -1.14
LINC00963-214ENST00000622680 IGKV1-39P01597 117 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 IGKV1D-39P04432 117 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 GIG44P09565 113 aaPredicted RBP7.95□□□□□ -1.14
LINC00963-214ENST00000622680 HLA-DMBP28068 263 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 RPS19P39019 145 aaKnown RBP7.95□□□□□ -1.14
LINC00963-214ENST00000622680 CMC4P56277 68 aaPredicted RBP7.95□□□□□ -1.14
LINC00963-214ENST00000622680 TCTAP57738 103 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 RPL11P62913 178 aaKnown RBP7.95□□□□□ -1.14
LINC00963-214ENST00000622680 TOMM20LQ6UXN7 152 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 STHQ8IWL8 128 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 OR5H2Q8NGV7 314 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 GINS3Q9BRX5 216 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 VSIRQ9H7M9 311 aa7.95□□□□□ -1.14
LINC00963-214ENST00000622680 ELOA3CA0A087WX78 387 aaPredicted RBP7.94□□□□□ -1.14
LINC00963-214ENST00000622680 A0A1B0GU03 582 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 C11orf94C9JXX5 98 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 GPR31O00270 319 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 RPL5P46777 297 aaKnown RBP7.94□□□□□ -1.14
LINC00963-214ENST00000622680 PAFAH1B2P68402 229 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 IZUMO4Q1ZYL8 232 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 DHRS11Q6UWP2 260 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 ZNF767PQ75MW2 155 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 TRPT1Q86TN4 253 aaKnown RBP7.94□□□□□ -1.14
LINC00963-214ENST00000622680 CMTM1Q8IZ96 169 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 STXBP6Q8NFX7 210 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 SEC22AQ96IW7 307 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 TXN2Q99757 166 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 CLEC5AQ9NY25 188 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 COMMD3Q9UBI1 195 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 ANAPC10Q9UM13 185 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 CELA1Q9UNI1 258 aa7.94□□□□□ -1.14
LINC00963-214ENST00000622680 PUS1Q9Y606 427 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00963-214ENST00000622680 KNCNA6PVL3 124 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 HRH1P35367 487 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 ALDH3B2P48448 385 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 RORCP51449 518 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 TAS2R46P59540 309 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 TAS2R20P59543 309 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 PRCDQ00LT1 54 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 TBC1D26Q86UD7 250 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 CROCCP3Q8IVE0 287 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 CADM3Q8N126 398 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 SAMD12Q8N8I0 201 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 OR4A16Q8NH70 328 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 MRGPRFQ96AM1 343 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 TSC22D3Q99576 134 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 SCRT1Q9BWW7 348 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 HRH4Q9H3N8 390 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 FKBP11Q9NYL4 201 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 X6R8D5 127 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 HSPG2P98160 4391 aa7.93□□□□□ -1.14
LINC00963-214ENST00000622680 TRAV10A0A0B4J240 114 aa7.92□□□□□ -1.14
LINC00963-214ENST00000622680 FAM25AB3EWG3 89 aa7.92□□□□□ -1.14
LINC00963-214ENST00000622680 FAM25CB3EWG5 89 aa7.92□□□□□ -1.14
LINC00963-214ENST00000622680 FAM25GB3EWG6 89 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms