RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 SLC25A15Q9Y619 301 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 ADAMTS9Q9P2N4 1935 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 A0A1B0GV90 55 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 C15orf62A8K5M9 175 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■□□□□ 8.9
MSH6-215ENST00000622629 SCGB2A2Q13296 93 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 C1QL4Q86Z23 238 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 PRR7Q8TB68 274 aa10.63□□□□□ -0.71
MSH6-215ENST00000622629 MT-ND6P03923 174 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 SPATA31B1PQ5VZV4 182 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 Q6ZR03 302 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 TMEM144Q7Z5S9 345 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.62□□□□□ -0.71
MSH6-215ENST00000622629 SEPSECSQ9HD40 501 aaKnown RBP10.62□□□□□ -0.71
MSH6-215ENST00000622629 THYN1Q9P016 225 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 HIGD1AQ9Y241 93 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 IGHV1-69-2A0A0G2JMI3 117 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
MSH6-215ENST00000622629 UPK2O00526 184 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 FAM57AQ8TBR7 257 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 TDGF1P13385 188 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 PLA2G2CQ5R387 149 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 Q6ZSR3 168 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 LINC00305Q7Z4B0 112 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 LPAR2Q9HBW0 351 aa10.62□□□□□ -0.71
MSH6-215ENST00000622629 ANKHD1Q8IWZ3 2542 aaKnown RBP10.61□□□□□ -0.71
MSH6-215ENST00000622629 PPIAL4CA0A0B4J2A2 164 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.61□□□□□ -0.71
MSH6-215ENST00000622629 TM4SF5O14894 197 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 PPIAL4GP0DN37 164 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 ERVK11-1P61568 191 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 ZNF726P1Q15940 193 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 MBNL2Q5VZF2 373 aaKnown RBP10.61□□□□□ -0.71
MSH6-215ENST00000622629 RPRMLQ8N4K4 120 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 Q8NFD4 153 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 TMEM242Q9NWH2 141 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 IL36BQ9NZH7 164 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 IGKV1D-33P01593 117 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 IGKV1-33P01594 117 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 IGHG3P01860 377 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 HLA-DQA1P01909 254 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 VAMP3Q15836 100 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 HAPLN4Q86UW8 402 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 A8MWL6 223 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 ISLRO14498 428 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
MSH6-215ENST00000622629 LINC01551Q86U37 167 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 TMEM170AQ8WVE7 144 aa10.61□□□□□ -0.71
MSH6-215ENST00000622629 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 MGST2Q99735 147 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 IGHV3-35A0A0C4DH35 117 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 CRIP3Q6Q6R5 217 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 ZNF474Q6S9Z5 364 aaPredicted RBP10.6□□□□□ -0.71
MSH6-215ENST00000622629 FBXL15Q9H469 300 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 ZNRD1Q9P1U0 126 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 S4R3C0 116 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 ATOH7Q8N100 152 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 MUC15Q8N387 334 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 PNKDQ8N490 385 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 C19orf24Q9BVV8 132 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
MSH6-215ENST00000622629 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
MSH6-215ENST00000622629 EML5Q05BV3 1969 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 PYYP10082 97 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 LGALS7P47929 136 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 RELBQ01201 579 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 TMEM177Q53S58 311 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 LYPD6BQ8NI32 183 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 RALYQ9UKM9 306 aaKnown RBP10.59□□□□□ -0.71
MSH6-215ENST00000622629 C10orf142B7Z368 130 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 AMBPP02760 352 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 MLANAQ16655 118 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 TEX38Q6PEX7 206 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 REC114Q7Z4M0 266 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 IGF2RP11717 2491 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 TIMP3P35625 211 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 FOXA3P55318 350 aaPredicted RBP10.59□□□□□ -0.71
MSH6-215ENST00000622629 TMEM30BQ3MIR4 351 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 LHFPL4Q7Z7J7 247 aa10.59□□□□□ -0.71
MSH6-215ENST00000622629 FOXH1O75593 365 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 NBEAP1P0C6P0 100 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 LMO1P25800 156 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 EAF1Q96JC9 268 aaPredicted RBP10.58□□□□□ -0.72
MSH6-215ENST00000622629 AGMATQ9BSE5 352 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 PRCDQ00LT1 54 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 CLEC7AQ9BXN2 247 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
MSH6-215ENST00000622629 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 CA1P00915 261 aaPredicted RBP10.58□□□□□ -0.72
MSH6-215ENST00000622629 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
MSH6-215ENST00000622629 FCGR2BP31994 310 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms