RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 PRRC2BQ5JSZ5 2229 aaKnown RBP10.17□□□□□ -0.78
SLC6A6-210ENST00000622186 H0YL77 283 aa10.17□□□□□ -0.78
SLC6A6-210ENST00000622186 IGHV1-2P23083 117 aa10.17□□□□□ -0.78
SLC6A6-210ENST00000622186 MESP2Q0VG99 397 aa10.17□□□□□ -0.78
SLC6A6-210ENST00000622186 GGTLC1Q9BX51 225 aa10.17□□□□□ -0.78
SLC6A6-210ENST00000622186 TNFRSF6BO95407 300 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 ASCC3Q8N3C0 2202 aaKnown RBP10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 TRAV25A0A0B4J276 109 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 CACNA1SQ13698 1873 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 STPG2Q8N412 459 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 MYO18AQ92614 2054 aaKnown RBP10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 FXYD1O00168 92 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 LMO1P25800 156 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 MDC1Q14676 2089 aaKnown RBP10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 CD300EQ496F6 205 aaPredicted RBP10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 LHFPL6Q9Y693 200 aa10.16□□□□□ -0.78
SLC6A6-210ENST00000622186 ESDP10768 282 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 APOC4P55056 127 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 XAF1Q6GPH4 301 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 LCN12Q6JVE5 192 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 MSRB3Q8IXL7 192 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 CFHR5Q9BXR6 569 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 C12orf77C9JDV5 145 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 CD5LO43866 347 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 KLRD1Q13241 179 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 SPSB3Q6PJ21 355 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 GATA2P23769 480 aaPredicted RBP10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 GNG5P63218 68 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 OR11H7Q8NGC8 314 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 TPRP12270 2363 aaKnown RBP10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 SCN3AQ9NY46 2000 aa10.15□□□□□ -0.78
SLC6A6-210ENST00000622186 IGKV2D-24A0A075B6R9 120 aa10.15□□□□□ -0.79
SLC6A6-210ENST00000622186 SMIM6P0DI80 62 aa10.15□□□□□ -0.79
SLC6A6-210ENST00000622186 COQ2Q96H96 371 aa10.15□□□□□ -0.79
SLC6A6-210ENST00000622186 ZNF638Q14966 1978 aaKnown RBP10.15□□□□□ -0.79
SLC6A6-210ENST00000622186 MYH7BA7E2Y1 1941 aa10.15□□□□□ -0.79
SLC6A6-210ENST00000622186 CENPVL1A0A0U1RR11 272 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 LEPROTO15243 131 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 SSBP4Q9BWG4 385 aaPredicted RBP10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 NANOS3P60323 173 aaKnown RBP10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 C15orf61A6NNL5 157 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 TAL2Q16559 108 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 AKAP12Q02952 1782 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 KLF4O43474 513 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 FCN3O75636 299 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 TNFSF13O75888 250 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 TIAF1O95411 115 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 LIMS2Q7Z4I7 341 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 FSTP19883 344 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 SLIRPQ9GZT3 109 aaKnown RBP10.14□□□□□ -0.79
SLC6A6-210ENST00000622186 DPRXA6NFQ7 191 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 MRPL14Q6P1L8 145 aaKnown RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 CXCL3P19876 107 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 ZNF474Q6S9Z5 364 aaPredicted RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 MIR17HGQ75NE6 70 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 RP1L1Q8IWN7 2480 aaPredicted RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 SLC17A3O00476 420 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 GCM2O75603 506 aaPredicted RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 ZNF672Q499Z4 452 aaPredicted RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 DPM2O94777 84 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 FUT5Q11128 374 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 KLF5Q13887 457 aaPredicted RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 C2orf68Q2NKX9 166 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 NHP2Q9NX24 153 aaKnown RBP10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
SLC6A6-210ENST00000622186 C17orf98A8MV24 154 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 CELA3BP08861 270 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 ZNF345Q14585 488 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 TMEM155Q4W5P6 130 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 TFF3Q07654 80 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 SAA2-SAA4A0A096LPE2 208 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 SAA2P0DJI9 122 aaPredicted RBP10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 Q96M66 194 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 TOGARAM1Q9Y4F4 1720 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 SCO2A0A1W2PP80 73 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 GPHB5Q86YW7 130 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 WDYHV1Q96HA8 205 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 LSM4Q9Y4Z0 139 aaKnown RBP10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 NPIPB13A6NJU9 1138 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 NPIPB5A8MRT5 1133 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 C15orf32Q32M92 178 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 ANKRD36CQ5JPF3 1778 aa10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 KIAA0100Q14667 2235 aaKnown RBP10.12□□□□□ -0.79
SLC6A6-210ENST00000622186 CACNA1GO43497 2377 aa10.11□□□□□ -0.79
SLC6A6-210ENST00000622186 SRRM4A7MD48 611 aaKnown RBP10.11□□□□□ -0.79
SLC6A6-210ENST00000622186 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
SLC6A6-210ENST00000622186 NDPQ00604 133 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms