RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ST6GALNAC6Q969X2 333 aa7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 FLYWCH2Q96CP2 140 aaKnown RBP7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 SLC25A2Q9BXI2 301 aa7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 ZNF430Q9H8G1 570 aaPredicted RBP7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 DNAJC4Q9NNZ3 241 aa7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 ZNRD1Q9P1U0 126 aa7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 KAAG1Q9UBP8 84 aa7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 NAGKQ9UJ70 344 aa7.79□□□□□ -1.16
IGHV3-54-201ENST00000622166 KIR2DL5BA0A0G2JN68 375 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 KIR2DL5BA0A0G2JPC4 375 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 A0A1B0GUS0 222 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 VSTM5A8MXK1 200 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 GGTLC3B5MD39 225 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 PRRG2O14669 202 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 NDUFB3O43676 98 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 OR7C2O60412 319 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 CRISP2P16562 243 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 CBLN1P23435 193 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 GATA2P23769 480 aaPredicted RBP7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 CHRNB4P30926 498 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 TPPP2P59282 170 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 SSTP61278 116 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 CX3CL1P78423 397 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 OR5I1Q13606 314 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 ASCL5Q7RTU5 278 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 WFDC8Q8IUA0 241 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 KIR2DL5AQ8N109 375 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 OR4C13Q8NGP0 309 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 MS4A10Q96PG2 267 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 ZNF835Q9Y2P0 537 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 WASHC3Q9Y3C0 194 aa7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 YLPM1P49750 1951 aaKnown RBP7.78□□□□□ -1.16
IGHV3-54-201ENST00000622166 IGKV1D-37A0A075B6S9 117 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 SMIM27A0A1W2PRY6 76 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 TCRBV4S1A1TA0A5B7 111 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 CRYGCP07315 174 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 LOXP28300 417 aaPredicted RBP7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 MC5RP33032 325 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 IER3P46695 156 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 RANP62826 216 aaKnown RBP7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 SUMO1P63165 101 aaKnown RBP7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 PAX2Q02962 417 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 BSPH1Q075Z2 132 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 MRGPRG-AS1Q2M3A8 158 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 VMA21Q3ZAQ7 101 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 TMEM155Q4W5P6 130 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 LRRC10Q5BKY1 277 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 LYPD2Q6UXB3 125 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 PATE2Q6UY27 113 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 TMEM136Q6ZRR5 245 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 OR8I2Q8N0Y5 310 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 OR2T6Q8NHC8 308 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 SAP30LQ9HAJ7 183 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 TMEM106BQ9NUM4 274 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 CDC42EP3Q9UKI2 254 aa7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 POLR3KQ9Y2Y1 108 aaPredicted RBP7.77□□□□□ -1.17
IGHV3-54-201ENST00000622166 CADP27708 2225 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 URB1O60287 2271 aaKnown RBP7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 TRAV5A0A0B4J249 113 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 IZUMO1RA6ND01 250 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 SNURFLB1AK76 121 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 E7EUB6 86 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 FCN1O00602 326 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 KLK10O43240 276 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 COX7A2P2O60397 106 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 FSTL3O95633 263 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 AMY1AP04745 511 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 LGALS7P47929 136 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 RASL11AQ6T310 242 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 TEX45Q8NA69 505 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 ST6GALNAC3Q8NDV1 305 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 OR10X1Q8NGY0 326 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 H1FXQ92522 213 aaKnown RBP7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 RNASE6Q93091 150 aaKnown RBP7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 MBD6Q96DN6 1003 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 WFIKKN1Q96NZ8 548 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 PAXXQ9BUH6 204 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 FNDC4Q9H6D8 234 aaPredicted RBP7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 CTSZQ9UBR2 303 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 CFAP54Q96N23 3096 aa7.76□□□□□ -1.17
IGHV3-54-201ENST00000622166 A0A1B0GV90 55 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 GRIFINA4D1Z8 144 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 SERF1AO75920 110 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 HLA-DQA1P01909 254 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 REG1AP05451 166 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 CRYGBP07316 175 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 FRMD6-AS1P0C7T7 363 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 MYCNOSP40205 109 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 BPIFB3P59826 476 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 UBE2L3P68036 154 aaKnown RBP7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 SSBP2P81877 361 aaPredicted RBP7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 MORN5Q5VZ52 161 aa7.75□□□□□ -1.17
IGHV3-54-201ENST00000622166 ETFRF1Q6IPR1 90 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms