RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 RD3LP0DJH9 198 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 CT45A6P0DMU7 189 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 CT45A5P0DMU8 189 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 CT45A7P0DMV0 189 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 GNG10P50151 68 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 RPL15P61313 204 aaKnown RBP14.17□□□□□ -0.14
FAM3A-222ENST00000621967 RAB31Q13636 194 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 GAMTQ14353 236 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 DEFB108BQ8NET1 73 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 C11orf52Q96A22 123 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 SFRP2Q96HF1 295 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 CCL19Q99731 98 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 FUT9Q9Y231 359 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 ARFGEF3Q5TH69 2177 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 PGPEP1LA6NFU8 196 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 MYOD1P15172 320 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 C9orf152Q5JTZ5 239 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 SPATA31B1PQ5VZV4 182 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 AURKAIP1Q9NWT8 199 aaPredicted RBP14.17□□□□□ -0.14
FAM3A-222ENST00000621967 GATCO43716 136 aaKnown RBP14.16□□□□□ -0.14
FAM3A-222ENST00000621967 LINC00869P0C866 280 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 IRF2P14316 349 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 CCL8P80075 99 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 JOSD1Q15040 202 aaPredicted RBP14.16□□□□□ -0.14
FAM3A-222ENST00000621967 RAB1BQ9H0U4 201 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 LINC00312Q9Y6C7 94 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 ARL2-SNX15V9GYD0 113 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 HECTD1Q9ULT8 2610 aa14.16□□□□□ -0.14
FAM3A-222ENST00000621967 MDFIC2A0A1B0GVS7 189 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 J3QR06 171 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 ATP5IP56385 69 aaPredicted RBP14.15□□□□□ -0.14
FAM3A-222ENST00000621967 RTL8BQ17RB0 113 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 SAP30LQ9HAJ7 183 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 PLEKHA3Q9HB20 300 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 SLC35D1Q9NTN3 355 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 DCAF16Q9NXF7 216 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 BET1LQ9NYM9 111 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 SLC25A10Q9UBX3 287 aaPredicted RBP14.15□□□□□ -0.14
FAM3A-222ENST00000621967 SLC45A2Q9UMX9 530 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 TACC2O95359 2948 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 hADV38S2A0JD32 116 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 SRRM4A7MD48 611 aaKnown RBP14.15□□□□□ -0.14
FAM3A-222ENST00000621967 MT-CO2P00403 227 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 IGKV1-16P04430 117 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 CDKN1AP38936 164 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 ZNF833PQ6ZTB9 187 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 TMEM37Q8WXS4 190 aa14.15□□□□□ -0.14
FAM3A-222ENST00000621967 AREGP15514 252 aa14.14□□□□□ -0.15
FAM3A-222ENST00000621967 TNFRSF1AP19438 455 aa14.14□□□□□ -0.15
FAM3A-222ENST00000621967 C2orf83Q53S99 150 aa14.14□□□□□ -0.15
FAM3A-222ENST00000621967 TEX38Q6PEX7 206 aa14.14□□□□□ -0.15
FAM3A-222ENST00000621967 OCC1Q8TAD7 63 aa14.14□□□□□ -0.15
FAM3A-222ENST00000621967 LY96Q9Y6Y9 160 aa14.14□□□□□ -0.15
FAM3A-222ENST00000621967 C9JCJ5 164 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 PKIAP61925 76 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 RPL31P62899 125 aaKnown RBP14.13□□□□□ -0.15
FAM3A-222ENST00000621967 MEF2CQ06413 473 aaPredicted RBP14.13□□□□□ -0.15
FAM3A-222ENST00000621967 NRGNQ92686 78 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 HINT2Q9BX68 163 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 FKBP11Q9NYL4 201 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 FBN2P35556 2912 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 ABCA12Q86UK0 2595 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 A0A0U1RQK1 487 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 TEX50A0A1B0GTY4 177 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 ZNF320A2RRD8 509 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 NKX6-3A6NJ46 265 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 FOXH1O75593 365 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 GZMBP10144 247 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 PAX1P15863 534 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 CNN1P51911 297 aaKnown RBP14.13□□□□□ -0.15
FAM3A-222ENST00000621967 KRTAP10-9P60411 292 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 PRSS8Q16651 343 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 OR5B3Q8NH48 314 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 SGMS2Q8NHU3 365 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 ZNRD1Q9P1U0 126 aa14.13□□□□□ -0.15
FAM3A-222ENST00000621967 SPG11Q96JI7 2443 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 SAA1P0DJI8 122 aaPredicted RBP14.12□□□□□ -0.15
FAM3A-222ENST00000621967 MIR17HGQ75NE6 70 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 OR4P4Q8NGL7 312 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 OR10G8Q8NGN5 311 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 OR1L8Q8NGR8 309 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 OSR1Q8TAX0 266 aaPredicted RBP14.12□□□□□ -0.15
FAM3A-222ENST00000621967 SLC35E1Q96K37 410 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 GAL3ST2Q9H3Q3 398 aa14.12□□□□□ -0.15
FAM3A-222ENST00000621967 TRAV9-1A0A075B6T8 112 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 IGKV1OR2-108A0A075B7D4 117 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 K7EN84 100 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 PNKDQ8N490 385 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 NEU4Q8WWR8 484 aaPredicted RBP14.11□□□□□ -0.15
FAM3A-222ENST00000621967 UHRF2Q96PU4 802 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 NABP2Q9BQ15 211 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 TRAPPC1Q9Y5R8 145 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 RNASE2P10153 161 aaKnown RBP14.11□□□□□ -0.15
FAM3A-222ENST00000621967 NDUFB7P17568 137 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 COL8A2P25067 703 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 YPEL3P61236 119 aaPredicted RBP14.11□□□□□ -0.15
FAM3A-222ENST00000621967 DEFA6Q01524 100 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 TMEM167BQ9NRX6 74 aa14.11□□□□□ -0.15
FAM3A-222ENST00000621967 OVOL3O00110 214 aa14.1□□□□□ -0.15
FAM3A-222ENST00000621967 FCN3O75636 299 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms