RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LRTM2Q8N967 370 aa4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 OR5AK2Q8NH90 309 aa4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 LGALS12Q96DT0 336 aa4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 ADTRPQ96IZ2 230 aa4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 SAV1Q9H4B6 383 aaPredicted RBP4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 AK3Q9UIJ7 227 aa4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 F11RQ9Y624 299 aaKnown RBP4.4□□□□□ -1.7
SCAMP1-206ENST00000618166 MFNGO00587 321 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 COX4I1P13073 169 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 NPPCP23582 126 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 HTR2CP28335 458 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 TSPOP30536 169 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 ATP6V1E1P36543 226 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 PPP3R1P63098 170 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 ZNF79Q15937 498 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 RBM48Q5RL73 367 aaKnown RBP4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 FAM78BQ5VT40 261 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 LYPD5Q6UWN5 251 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 KCTD9Q7L273 389 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 TPRA1Q86W33 373 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 JAGN1Q8N5M9 183 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 PPP1R14BQ96C90 147 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 TEX12Q9BXU0 123 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 KCNK15Q9H427 330 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 TMEM231Q9H6L2 316 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 WARS2Q9UGM6 360 aaKnown RBP4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 COX11Q9Y6N1 276 aa4.4□□□□□ -1.71
SCAMP1-206ENST00000618166 TRAV8-7A0A075B6U6 113 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 GAGE12BA1L429 117 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 I3L2K1 104 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 CRXO43186 299 aaPredicted RBP4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 GAGE7O76087 117 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 HTN1P15515 57 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 CELP19835 753 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 EVI2AP22794 236 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 CRYBB3P26998 211 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 HOXA1P49639 335 aaPredicted RBP4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 RORCP51449 518 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 MRPS15P82914 257 aaKnown RBP4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 ASAH1Q13510 395 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 TIMM50Q3ZCQ8 353 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 ACSM3Q53FZ2 586 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 GID4Q8IVV7 300 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 BAP18Q8IXM2 172 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 HRASLSQ9HDD0 168 aa4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 RCL1Q9Y2P8 373 aaKnown RBP4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 RBM7Q9Y580 266 aaKnown RBP4.39□□□□□ -1.71
SCAMP1-206ENST00000618166 A0A0A6YYD4 124 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 TRBV6-6A0A0A6YYG2 114 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 DAPL1A0PJW8 107 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 TMEM212A6NML5 194 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 M0R2Z0 102 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 CYB5BO43169 146 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 GNG7O60262 68 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 CD37P11049 281 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 MFAP4P55083 255 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 UNC119Q13432 240 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 AMTNQ6UX39 209 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 FOXI2Q6ZQN5 318 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 LINC00612Q8N6U2 182 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 OR13F1Q8NGS4 319 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 OR10J6PQ8NGY7 276 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 MOB3AQ96BX8 217 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 TLCD1Q96CP7 247 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 LINC00052Q96N35 136 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 UQCC2Q9BRT2 126 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 TMBIM4Q9HC24 238 aa4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 TIMM8BQ9Y5J9 83 aaPredicted RBP4.38□□□□□ -1.71
SCAMP1-206ENST00000618166 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 TRAV12-2A0A075B6T6 113 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 TEX50A0A1B0GTY4 177 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 RBFOX3A6NFN3 312 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 TRDCB7Z8K6 153 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 J3QRE1 110 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 NDUFAB1O14561 156 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 OGG1O15527 345 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 MT-CO2P00403 227 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 IGLV2-14P01704 120 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 SRMP19623 302 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 GTF2A1P52655 376 aaPredicted RBP4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 TAS2R43P59537 309 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 SPINK13Q1W4C9 94 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 C12orf73Q69YU5 71 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 C16orf54Q6UWD8 224 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 ZNF600Q6ZNG1 722 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 OR8J1Q8NGP2 316 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 OR4S2Q8NH73 311 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 MAFIPQ8WZ33 124 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 METTL26Q96S19 204 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 ABHD1Q96SE0 405 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 HINT2Q9BX68 163 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 KRTAP4-4Q9BYR3 166 aa4.37□□□□□ -1.71
SCAMP1-206ENST00000618166 WDR12Q9GZL7 423 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms