RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	KIR2DS2	P43631	304 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	RPL31	P62899	125 aa	Known RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PRB3	Q04118	309 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PRSS8	Q16651	343 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PRR30	Q53SZ7	412 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TEPP	Q6URK8	271 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	GFRAL	Q6UXV0	394 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	STPG3	Q8N7X2	389 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR10W1	Q8NGF6	305 aa		11.36	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CSMD1	Q96PZ7	3565 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TRBV24-1	A0A075B6N3	115 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SCO2	A0A1W2PP80	73 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PRSS46	E5RG02	174 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CEACAM3	P40198	252 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FAM78B	Q5VT40	261 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	HIST3H2BB	Q8N257	126 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR52E5	Q8NH55	327 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ZFP30	Q9Y2G7	519 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390		A0A1B0GV72	72 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SEC14L6	B5MCN3	397 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	HRAS	P01112	189 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	IGHV3-48	P01763	117 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	MRPL52	Q86TS9	123 aa	Known RBP	11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR4P4	Q8NGL7	312 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	NEUROG1	Q92886	237 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PLEKHA3	Q9HB20	300 aa		11.35	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FAM90A9P	A6NNJ1	464 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PMS2P11	Q13670	270 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	DIAPH2-AS1	Q14236	149 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	LYPD2	Q6UXB3	125 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ZNF664	Q8N3J9	261 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	SAP30L	Q9HAJ7	183 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	TMEM14B	Q9NUH8	114 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	FUT9	Q9Y231	359 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	hADV38S2	A0JD32	116 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PHOX2A	O14813	284 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	MPDU1	O75352	247 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	CRYBA4	P53673	196 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	EFNB3	Q15768	340 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	ZNF439	Q8NDP4	499 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	OR1L6	Q8NGR2	347 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	RAB9B	Q9NP90	201 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	PTPRQ	Q9UMZ3	2332 aa		11.34	□□□□□ -0.59
CACNA1C-231	ENST00000616390	C17orf100	A8MU93	164 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	CCL25	O15444	150 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ZZEF1	O43149	2961 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TNFRSF1A	P19438	455 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	CHRNB4	P30926	498 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	DLX1	P56177	255 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RTL8B	Q17RB0	113 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LINC01551	Q86U37	167 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	MRPL20	Q9BYC9	149 aa	Known RBP	11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SAA1	P0DJI8	122 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR2T10	Q8NGZ9	312 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SRD5A3	Q9H8P0	318 aa		11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	FOXA2	Q9Y261	457 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PDE6D	O43924	150 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	CXorf1	O96002	111 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	FOXC1	Q12948	553 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SLC25A48	Q6ZT89	311 aa	Known RBP	11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	MIR17HG	Q75NE6	70 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ATRX	P46100	2492 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TRBV20OR9-2	A0A075B6H5	130 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390		A0A1B0GW15	77 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	THBD	P07204	575 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR5I1	Q13606	314 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RAB31	Q13636	194 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	HARBI1	Q96MB7	349 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	IGF2R	P11717	2491 aa		11.32	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TRGV8	A0A0C4DH27	118 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TEX50	A0A1B0GTY4	177 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	FCN3	O75636	299 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TMEM200B	Q69YZ2	307 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ANAPC16	Q96DE5	110 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	KCNIP2	Q9NS61	270 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	COL6A6	A6NMZ7	2263 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390		F6UZH7	168 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	GCHFR	P30047	84 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	HERV-K104	P63124	156 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR10X1	Q8NGY0	326 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ADTRP	Q96IZ2	230 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	CITED2	Q99967	270 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LSM4	Q9Y4Z0	139 aa	Known RBP	11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TNFRSF18	Q9Y5U5	241 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	MALRD1	Q5VYJ5	2156 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PPIAL4E	A0A075B759	164 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390		E7EUB6	86 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PPIAL4D	F5H284	164 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	UPK2	O00526	184 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR10J4	P0C629	311 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	APELA	P0DMC3	54 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PPIAL4F	P0DN26	164 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RHOB	P62745	196 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PSG5	Q15238	335 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	C11orf42	Q8N5U0	333 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RAB1C	Q92928	201 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ACY3	Q96HD9	319 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms