RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZNF138P52744 262 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 TBC1D28Q2M2D7 210 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 LINC00596Q86U02 117 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 CNEP1R1Q8N9A8 125 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 S1PR3Q99500 378 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 THYN1Q9P016 225 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 TRBV6-6A0A0A6YYG2 114 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 LY6G6EA0A0G2JKS1 128 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 TIMM8AO60220 97 aaPredicted RBP10.86□□□□□ -0.67
MSH6-214ENST00000616033 NPY1RP25929 384 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 BMI1P35226 326 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 ZNF718Q3SXZ3 478 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 FAM201AQ5SY85 155 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 DEFB108BQ8NET1 73 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 U3KQA8 63 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 LOC102723996A0A087X1L8 192 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 DNPH1O43598 174 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 CTRLP40313 264 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 Q0VG73 95 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 ABHD17BQ5VST6 288 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 LINC00173Q6ZV60 143 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 ZNRF1Q8ND25 227 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 DUSP23Q9BVJ7 150 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 MBNL3Q9NUK0 354 aaKnown RBP10.86□□□□□ -0.67
MSH6-214ENST00000616033 CORTO00230 105 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 GFRA3O60609 400 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 HOXC12P31275 282 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 EBLN2Q6P2I7 272 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 Q8TCH9 128 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 BLNKQ8WV28 456 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
MSH6-214ENST00000616033 TMEM186Q96B77 213 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 NABP2Q9BQ15 211 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 PKIBQ9C010 78 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 ZNRD1Q9P1U0 126 aa10.86□□□□□ -0.67
MSH6-214ENST00000616033 A0A087X0K7 114 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 APELAP0DMC3 54 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 CLDN18P56856 261 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 SSX8Q7RTT4 187 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 HILPDAQ9Y5L2 63 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 CEP192Q8TEP8 1941 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 WNK2Q9Y3S1 2297 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 AMY1AP04745 511 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 PYYP10082 97 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 CX3CL1P78423 397 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 PSG9Q00887 426 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 SMIM21Q3B7S5 101 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 PPP1R32Q7Z5V6 425 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 OR5B3Q8NH48 314 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 WDR54Q9H977 334 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 TECTAO75443 2155 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 DMXL2Q8TDJ6 3036 aa10.85□□□□□ -0.67
MSH6-214ENST00000616033 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 PROP1O75360 226 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 WDR73Q6P4I2 378 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 OR52E5Q8NH55 327 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 OR9G1Q8NH87 305 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 C18orf32Q8TCD1 76 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 LSM4Q9Y4Z0 139 aaKnown RBP10.84□□□□□ -0.67
MSH6-214ENST00000616033 TRAV8-6A0A0B4J262 113 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 PPBPP02775 128 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 CEACAM3P40198 252 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 GNG5P63218 68 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 DCAF12Q5T6F0 453 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 SAP25Q8TEE9 199 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 RND1Q92730 232 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 TNFRSF14Q92956 283 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 TRAV30A0A087WSZ9 112 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 GGTLC3B5MD39 225 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 DUTP33316 252 aaKnown RBP10.84□□□□□ -0.67
MSH6-214ENST00000616033 TM4SF20Q53R12 229 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
MSH6-214ENST00000616033 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
MSH6-214ENST00000616033 B4GALT7Q9UBV7 327 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 NPIPB11E5RHQ5 1161 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 P0C879 139 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 MORN5Q5VZ52 161 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 PMS2CLQ68D20 193 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 SPATA12Q7Z6I5 190 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 TMEM251Q8N6I4 163 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 LRRC29Q8WV35 223 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 NEUROG1Q92886 237 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 ASCL2Q99929 193 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 OR4C46A6NHA9 309 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 ZNF134P52741 427 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 UBE2G1P62253 170 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 IL11RAQ14626 422 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 Q8IYB0 196 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 OR1B1Q8NGR6 318 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 SRSF8Q9BRL6 282 aaKnown RBP10.83□□□□□ -0.68
MSH6-214ENST00000616033 TTTY12Q9BZ98 90 aa10.83□□□□□ -0.68
MSH6-214ENST00000616033 IGHV3-21A0A0B4J1V1 117 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 KLF14Q8TD94 323 aaPredicted RBP10.82□□□□□ -0.68
MSH6-214ENST00000616033 RAB1CQ92928 201 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 TRIB1Q96RU8 372 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms