RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 RBM48Q5RL73 367 aaKnown RBP4.68□□□□□ -1.66
MUC1-227ENST00000615517 TMPRSS11AQ6ZMR5 421 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 RHOXF1Q8NHV9 184 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 APH1BQ8WW43 257 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 RNF125Q96EQ8 232 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 HSD17B10Q99714 261 aaKnown RBP4.68□□□□□ -1.66
MUC1-227ENST00000615517 TXN2Q99757 166 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 URM1Q9BTM9 101 aaKnown RBP4.68□□□□□ -1.66
MUC1-227ENST00000615517 DCSTAMPQ9H295 470 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 NDUFA4L2Q9NRX3 87 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 TAS2R8Q9NYW2 309 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 OAZ3Q9UMX2 235 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 POMPQ9Y244 141 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 MRPS16Q9Y3D3 137 aaKnown RBP4.68□□□□□ -1.66
MUC1-227ENST00000615517 OR2W1Q9Y3N9 320 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 HLA-DRB4X5D2U9 266 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 MT-CO2P00403 227 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 HBE1P02100 147 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 NFYAP23511 347 aaPredicted RBP4.67□□□□□ -1.66
MUC1-227ENST00000615517 CRYBB3P26998 211 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 PPP5CP53041 499 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 P2RY14Q15391 338 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 SMN1Q16637 294 aaKnown RBP4.67□□□□□ -1.66
MUC1-227ENST00000615517 RRN3P1Q2M238 152 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 ACSM3Q53FZ2 586 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 TTC23Q5W5X9 447 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 THOC7Q6I9Y2 204 aaKnown RBP4.67□□□□□ -1.66
MUC1-227ENST00000615517 HSD17B13Q7Z5P4 300 aaPredicted RBP4.67□□□□□ -1.66
MUC1-227ENST00000615517 LSM10Q969L4 123 aaKnown RBP4.67□□□□□ -1.66
MUC1-227ENST00000615517 MISP3Q96FF7 219 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 GFI1Q99684 422 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 SLC35B3Q9H1N7 401 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 TMEM231Q9H6L2 316 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 TMEM140Q9NV12 185 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 PFDN2Q9UHV9 154 aa4.67□□□□□ -1.66
MUC1-227ENST00000615517 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 A0A1W2PS18 150 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 PLAC8L1A1L4L8 177 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 LYRM9A8MSI8 78 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 FAM90A26D6RGX4 464 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 TNFSF12O43508 249 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 GNG7O60262 68 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 ALPLP05186 524 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 ATP5G1P05496 136 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 FGF2P09038 288 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 NPPCP23582 126 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 ATP5G3P48201 142 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 TAS2R31P59538 309 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 Q6ZS49 121 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 SPAG16Q8N0X2 631 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 OR1L8Q8NGR8 309 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 OR1P1Q8NH06 330 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 CHAC2Q8WUX2 184 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 Q96MT0 163 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 C7orf50Q9BRJ6 194 aaKnown RBP4.66□□□□□ -1.66
MUC1-227ENST00000615517 HINT2Q9BX68 163 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 ARL2BPQ9Y2Y0 163 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 U3KQE9 123 aa4.66□□□□□ -1.66
MUC1-227ENST00000615517 IGLV5-52A0A0A0MRZ9 124 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 DBX1A6NMT0 343 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 ZNF705GA8MUZ8 300 aaPredicted RBP4.65□□□□□ -1.67
MUC1-227ENST00000615517 MFNGO00587 321 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 WBP4O75554 376 aaKnown RBP4.65□□□□□ -1.67
MUC1-227ENST00000615517 SLC22A5O76082 557 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 TMEM50AO95807 157 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 HPRT1P00492 218 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 NQO2P16083 231 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 CALB2P22676 271 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 MRPS15P82914 257 aaKnown RBP4.65□□□□□ -1.67
MUC1-227ENST00000615517 KCTD21Q4G0X4 260 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 OR56B1Q8NGI3 324 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 GLMPQ8WWB7 406 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 FCGR1BQ92637 280 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 MOB3AQ96BX8 217 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 AIFM2Q9BRQ8 373 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 MAGT1Q9H0U3 335 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 ELF5Q9UKW6 265 aaPredicted RBP4.65□□□□□ -1.67
MUC1-227ENST00000615517 NSG2Q9Y328 171 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 GOLT1BQ9Y3E0 138 aa4.65□□□□□ -1.67
MUC1-227ENST00000615517 TRAV26-1A0A087WT03 109 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 A0A0J9YY99 117 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 CBY3A6NI87 242 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 M0QYG6 137 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 SULT1C2O00338 296 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 RBFOX2O43251 390 aaKnown RBP eCLIP4.64□□□□□ -1.67
MUC1-227ENST00000615517 ATP8B1O43520 1251 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 CD1AP06126 327 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 AZU1P20160 251 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 MAPK3P27361 379 aaPredicted RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 NKX2-1P43699 371 aaPredicted RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 CLDN12P56749 244 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 SNRPD3P62318 126 aaKnown RBP4.64□□□□□ -1.67
MUC1-227ENST00000615517 C16orf54Q6UWD8 224 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 ZNF114Q8NC26 417 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 DMBX1Q8NFW5 382 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 RXFP4Q8TDU9 374 aa4.64□□□□□ -1.67
MUC1-227ENST00000615517 PHYHIPQ92561 330 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms