RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ANXA3P12429 323 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 PLET1Q6UQ28 207 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 CACNG8Q8WXS5 425 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 PEMTQ9UBM1 199 aa12.7□□□□□ -0.38
CBWD3-211ENST00000615061 LSM4Q9Y4Z0 139 aaKnown RBP12.7□□□□□ -0.38
CBWD3-211ENST00000615061 A0A0B4J2A0 478 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 ZNF320A2RRD8 509 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 NAP1L6A6NFF2 107 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 MT-CO2P00403 227 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 RNASE2P10153 161 aaKnown RBP12.69□□□□□ -0.38
CBWD3-211ENST00000615061 GP9P14770 177 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 SNCAP37840 140 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 LGI3Q8N145 548 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 CENPSQ8N2Z9 138 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 SHPKQ9UHJ6 478 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 C2orf70A6NJV1 201 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 LGALS9O00182 355 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 PLA2G10O15496 165 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 NDUFB6O95139 128 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 ADMP35318 185 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 SPCS3P61009 180 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 Q56UQ5 140 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 SIGLEC8Q9NYZ4 499 aa12.69□□□□□ -0.38
CBWD3-211ENST00000615061 HUWE1Q7Z6Z7 4374 aaKnown RBP12.68□□□□□ -0.38
CBWD3-211ENST00000615061 TMEM213A2RRL7 107 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 SFT2D2O95562 160 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 ENY2Q9NPA8 101 aa12.68□□□□□ -0.38
CBWD3-211ENST00000615061 FOLR2P14207 255 aa12.67□□□□□ -0.38
CBWD3-211ENST00000615061 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
CBWD3-211ENST00000615061 BSCL2Q96G97 398 aaPredicted RBP12.67□□□□□ -0.38
CBWD3-211ENST00000615061 ZNF414Q96IQ9 312 aa12.67□□□□□ -0.38
CBWD3-211ENST00000615061 STAB2Q8WWQ8 2551 aa12.67□□□□□ -0.38
CBWD3-211ENST00000615061 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 CTSGP08311 255 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 SRPXP78539 464 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 BSXQ3C1V8 233 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 CD300EQ496F6 205 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-211ENST00000615061 CENPXA8MT69 81 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 A8MWP6 167 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 CBLN1P23435 193 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 SMCO1Q147U7 214 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 MLANAQ16655 118 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
CBWD3-211ENST00000615061 C7orf50Q9BRJ6 194 aaKnown RBP12.66□□□□□ -0.38
CBWD3-211ENST00000615061 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-211ENST00000615061 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-211ENST00000615061 LYRM1O43325 122 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 ANXA7P20073 488 aaKnown RBP12.65□□□□□ -0.38
CBWD3-211ENST00000615061 MFAP4P55083 255 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 LRTM2Q8N967 370 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 TMEM170AQ8WVE7 144 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 FNDC4Q9H6D8 234 aaPredicted RBP12.65□□□□□ -0.38
CBWD3-211ENST00000615061 MRPL36Q9P0J6 103 aaKnown RBP12.65□□□□□ -0.38
CBWD3-211ENST00000615061 TENM3Q9P273 2699 aa12.65□□□□□ -0.38
CBWD3-211ENST00000615061 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 HOXB5P09067 269 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.39
CBWD3-211ENST00000615061 DEFB114Q30KQ6 69 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 SPSB3Q6PJ21 355 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 LINC00299Q6ZSB3 139 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 TMEM190Q8WZ59 177 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 HSPB7Q9UBY9 170 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 FCGR2BP31994 310 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-211ENST00000615061 Q8N1Y9 231 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 CCDC32Q9BV29 185 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 RBKSQ9H477 322 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 MLXQ9UH92 298 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 SMAD5-AS1Q9Y6J3 95 aa12.64□□□□□ -0.39
CBWD3-211ENST00000615061 NBEAL2Q6ZNJ1 2754 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 A0A1B0GU03 582 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 ZNF207O43670 478 aaKnown RBP12.63□□□□□ -0.39
CBWD3-211ENST00000615061 OR4E1P0C645 316 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 OPRK1P41145 380 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 HTR2BP41595 481 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
CBWD3-211ENST00000615061 CD69Q07108 199 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 DHRS2Q13268 280 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 LCN12Q6JVE5 192 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 SLC24A4Q8NFF2 622 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 B9D2Q9BPU9 175 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 C20orf24Q9BUV8 137 aa12.63□□□□□ -0.39
CBWD3-211ENST00000615061 NDUFA4O00483 81 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 NUPL2O15504 423 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms