RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 H3BP45 60 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 OR2J3O76001 311 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 OR8U8P0C7N1 319 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 P2RY1P47900 373 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 CAV2P51636 162 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 MFAP2P55001 183 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 RHOGP84095 191 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 PVRIGQ6DKI7 326 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 RNASEH2CQ8TDP1 164 aaKnown RBP11.46□□□□□ -0.57
CD48-203ENST00000613788 MISP3Q96FF7 219 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
CD48-203ENST00000613788 OR5AC2Q9NZP5 309 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 FBXL7Q9UJT9 491 aa11.46□□□□□ -0.57
CD48-203ENST00000613788 C15orf62A8K5M9 175 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 EXOSC2Q13868 293 aaKnown RBP11.45□□□□□ -0.58
CD48-203ENST00000613788 ETV3LQ6ZN32 361 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 AKAP14Q86UN6 197 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
CD48-203ENST00000613788 DMRT1Q9Y5R6 373 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 TRAV14DV4A0A0A6YYC5 116 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 TCRBV4S1A1TA0A5B7 111 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 SCAF4O95104 1147 aaKnown RBP11.45□□□□□ -0.58
CD48-203ENST00000613788 RPLP1P05386 114 aaKnown RBP11.45□□□□□ -0.58
CD48-203ENST00000613788 CD28P10747 220 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 LYL1P12980 280 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 TMEM14EPQ6UXP3 125 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 TMEM170AQ8WVE7 144 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
CD48-203ENST00000613788 ST6GAL2Q96JF0 529 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 CXorf58Q96LI9 332 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 UBE2E2Q96LR5 201 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 OR4C12Q96R67 309 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 MBD2Q9UBB5 411 aa11.45□□□□□ -0.58
CD48-203ENST00000613788 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 NDUFB8O95169 186 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 SLC25A4P12235 298 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 OPRK1P41145 380 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 C15orf32Q32M92 178 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 Q5BKY6 102 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 TCTEX1D4Q5JR98 221 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 ETFRF1Q6IPR1 90 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 ZNF491Q8N8L2 437 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
CD48-203ENST00000613788 I3L2K1 104 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 MT-CO2P00403 227 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 METTL15P1P0C7V9 234 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
CD48-203ENST00000613788 CDX1P47902 265 aaPredicted RBP11.43□□□□□ -0.58
CD48-203ENST00000613788 KIAA0141Q14154 515 aaPredicted RBP11.43□□□□□ -0.58
CD48-203ENST00000613788 KHDC1LQ5JSQ8 128 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 STX12Q86Y82 276 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 TCTE3Q8IZS6 198 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 TMEM252Q8N6L7 170 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 EEF1AKMT3Q96AZ1 226 aa11.43□□□□□ -0.58
CD48-203ENST00000613788 TSSC4Q9Y5U2 329 aaPredicted RBP11.43□□□□□ -0.58
CD48-203ENST00000613788 K7EIM0 57 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 GPX4P36969 197 aaPredicted RBP11.42□□□□□ -0.58
CD48-203ENST00000613788 SULT1A1P50225 295 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 OR8G2PQ6IF36 304 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 ZNF546Q86UE3 836 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 CACNG8Q8WXS5 425 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 CITED2Q99967 270 aaPredicted RBP11.42□□□□□ -0.58
CD48-203ENST00000613788 FBN1P35555 2871 aaKnown RBP11.42□□□□□ -0.58
CD48-203ENST00000613788 ATRQ13535 2644 aa11.42□□□□□ -0.58
CD48-203ENST00000613788 TRBV7-1A0A0A6YYK4 115 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 RPL12P30050 165 aaKnown RBP11.41□□□□□ -0.58
CD48-203ENST00000613788 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 DEFA5Q01523 94 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 CD69Q07108 199 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 C3orf56Q8N813 242 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 INO80EQ8NBZ0 244 aaPredicted RBP11.41□□□□□ -0.58
CD48-203ENST00000613788 ZC4H2Q9NQZ6 224 aa11.41□□□□□ -0.58
CD48-203ENST00000613788 FXYD6-FXYD2A0A087WZ82 144 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 IGHV3-21A0A0B4J1V1 117 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 MFSD2BA6NFX1 497 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 G3V3Q6 166 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 SMLR1H3BR10 107 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 CST7O76096 145 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 S100A11P31949 105 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 MFAP4P55083 255 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 HBG1P69891 147 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 HBG2P69892 147 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 EWSR1Q01844 656 aaKnown RBP eCLIP11.4□□□□□ -0.58
CD48-203ENST00000613788 BAXQ07812 192 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 MLANAQ16655 118 aa11.4□□□□□ -0.58
CD48-203ENST00000613788 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms