RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GNB1LQ9BYB4 327 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 YAE1D1Q9NRH1 226 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 RNF126Q9BV68 326 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 PSMB11A5LHX3 300 aa14.58□□□□□ -0.07
HMGXB3-206ENST00000613459 EPOPA6NHQ4 379 aa14.58□□□□□ -0.07
HMGXB3-206ENST00000613459 ST6GALNAC3Q8NDV1 305 aa14.58□□□□□ -0.07
HMGXB3-206ENST00000613459 C11orf68Q9H3H3 251 aaKnown RBP14.58□□□□□ -0.07
HMGXB3-206ENST00000613459 NXT2Q9NPJ8 142 aaKnown RBP14.58□□□□□ -0.07
HMGXB3-206ENST00000613459 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.07
HMGXB3-206ENST00000613459 ATXN7O15265 892 aaPredicted RBP14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 APOMO95445 188 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 IGHV3-48P01763 117 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 ATP1A1-AS1Q5TC04 95 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 TRAV8-2A0A0B4J237 113 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 NUDT10Q8NFP7 164 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 NUDT11Q96G61 164 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 BSPH1Q075Z2 132 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 LINC01560Q8TB33 94 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 SAA1P0DJI8 122 aaPredicted RBP14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 WBP1Q96G27 269 aa14.58□□□□□ -0.08
HMGXB3-206ENST00000613459 ATP5L2Q7Z4Y8 100 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 TCRBV4S1A1TA0A5B7 111 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 CEACAM1P13688 526 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 TMEM242Q9NWH2 141 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 HBDP02042 147 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 NR2C2APQ86WQ0 139 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 SLC25A28Q96A46 364 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 PROB1E7EW31 1015 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 TGFBR3LH3BV60 316 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 FAM27E3Q08E93 113 aa14.57□□□□□ -0.08
HMGXB3-206ENST00000613459 FAM168AQ92567 244 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 RNASE6Q93091 150 aaKnown RBP14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 PGPEP1Q9NXJ5 209 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 TRBV7-9A0A0J9YWB2 115 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 GFRA3O60609 400 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 DPM2O94777 84 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 PLPPR1Q8TBJ4 325 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 ORAOV1Q8WV07 137 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 SIGMAR1Q99720 223 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 PRCDQ00LT1 54 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 UNC13CQ8NB66 2214 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 CABIN1Q9Y6J0 2220 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 CELA3AP09093 270 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 LHX2P50458 406 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 ID3Q02535 119 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 TMEM95Q3KNT9 176 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 ORMDL2Q53FV1 153 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 ST20Q9HBF5 79 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 EPDR1Q9UM22 224 aa14.56□□□□□ -0.08
HMGXB3-206ENST00000613459 SAA2-SAA4A0A096LPE2 208 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 SAA2P0DJI9 122 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 SRSF1Q07955 248 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 CFAP161Q6P656 301 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BKO60814 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BJP06899 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BOP23527 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BBP33778 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BDP58876 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BCP62807 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST2H2BEQ16778 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BHQ93079 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BNQ99877 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HIST1H2BMQ99879 126 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 ANAPC13Q9BS18 74 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 TRAV8-4A0A0B4J246 113 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 TRAV21A0A0B4J279 112 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 COLCA2A8K830 154 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 TMEM133Q9H2Q1 129 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 SEC11AP67812 179 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HEPN1Q6WQI6 88 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 MORN2Q502X0 79 aa14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 FNDC4Q9H6D8 234 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-206ENST00000613459 HAX1O00165 279 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 LINC00614P0C842 121 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 CKAP5Q14008 2032 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 J3QRE1 110 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 IFI27P40305 119 aaPredicted RBP14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 CLEC19AQ6UXS0 136 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 NPFFR1Q9GZQ6 430 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 TAF1LQ8IZX4 1826 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 A0A1B0GW64 132 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 F2Z2F3 143 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 IGHV3-23P01764 117 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 OR2K2Q8NGT1 345 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 RNF125Q96EQ8 232 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 RNASE7Q9H1E1 156 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 LY6G6FQ5SQ64 297 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 MS4A6AQ9H2W1 248 aa14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 NHP2Q9NX24 153 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-206ENST00000613459 LYPD3O95274 346 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 RNASE4P34096 147 aaKnown RBP14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 C1QL4Q86Z23 238 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 SMPXQ9UHP9 88 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 SBF2Q86WG5 1849 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 HSD52Q0P140 79 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 NEUROG3Q9Y4Z2 214 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 TRGV11A0A075B6L2 103 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms