RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
SLC6A6-204ENST00000613060 TMEM91Q6ZNR0 172 aa10.09□□□□□ -0.79
SLC6A6-204ENST00000613060 LIMS2Q7Z4I7 341 aa10.09□□□□□ -0.79
SLC6A6-204ENST00000613060 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
SLC6A6-204ENST00000613060 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.82e-7■□□□□ 11.2
SLC6A6-204ENST00000613060 ERCC8Q13216 396 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 MYO18AQ92614 2054 aaKnown RBP10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 UBE2E1P51965 193 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 SSBP2P81877 361 aaPredicted RBP10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 SIGLEC15Q6ZMC9 328 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 C9orf62Q8N4C0 152 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 PAPPA2Q9BXP8 1791 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 A0A0J9YY99 117 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 PAX9P55771 341 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 NANOS3P60323 173 aaKnown RBP10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 ID3Q02535 119 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 ATXN8Q156A1 80 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 CACNG8Q8WXS5 425 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 C1orf159Q96HA4 380 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 ZNF257Q9Y2Q1 563 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 GCM2O75603 506 aaPredicted RBP10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 IGKV1D-12P01611 117 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 V9GYH0 126 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 LINC01549A6NIU2 74 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 SNAI2O43623 268 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 Q96M66 194 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 XCL2Q9UBD3 114 aa10.08□□□□□ -0.8
SLC6A6-204ENST00000613060 EFNA2O43921 213 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 PRB2P02812 416 aaPredicted RBP10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 CCL3L1P16619 93 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 RPL36AP83881 106 aaKnown RBP10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 RPL36ALQ969Q0 106 aaKnown RBP10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 IGHV3-16A0A0C4DH30 117 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 F8W735 103 aaPredicted RBP10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 FCN3O75636 299 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 LINC00614P0C842 121 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 TMEM249Q2WGJ8 235 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 LHFPL6Q9Y693 200 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 hADV29S1A0JD25 119 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 CD5LO43866 347 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 TCRAP04437 139 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 AQP3Q92482 292 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 Q9H3A6 140 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 ELF5Q9UKW6 265 aaPredicted RBP10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 DPRXA6NFQ7 191 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 F8VVB4 439 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 F8VWA3 439 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 EFNA4P52798 201 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 CRYBA2P53672 197 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 EGR4Q05215 589 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 C1orf100Q5SVJ3 147 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 ZNF562Q6V9R5 426 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 IGHV2OR16-5A0A0B4J2B6 119 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 TNFRSF6BO95407 300 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 TMEM158Q8WZ71 300 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 IGF2BP2-AS1Q96M15 143 aa10.07□□□□□ -0.8
SLC6A6-204ENST00000613060 DICER1Q9UPY3 1922 aaKnown RBP10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 SYNJ2BPP57105 145 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 CR1LQ2VPA4 569 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 IGLV1-36A0A0B4J1U3 117 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 TRBV5-5A0A0J9YX44 114 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 C9orf106Q8NAJ2 232 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 RNF183Q96D59 192 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 H0YL77 283 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 LGALS1P09382 135 aaKnown RBP10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 CSRP1P21291 193 aaKnown RBP10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 DMRT1Q9Y5R6 373 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 ZNF474Q6S9Z5 364 aaPredicted RBP10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 SPCS1Q9Y6A9 102 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 TTC3P53804 2025 aa10.06□□□□□ -0.8
SLC6A6-204ENST00000613060 E9PLN8 166 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 KLF4O43474 513 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 IGFBP2P18065 325 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 RND3P61587 244 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 LINC00477Q96M19 166 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 VKORC1Q9BQB6 163 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 MYH4Q9Y623 1939 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 KIAA0100Q14667 2235 aaKnown RBP10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 GTF3AQ92664 365 aaKnown RBP10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 PILRAQ9UKJ1 303 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 PAPPAQ13219 1627 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 EVPLQ92817 2033 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 SHROOM3Q8TF72 1996 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 M0R2P5 195 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 MSRB2Q9Y3D2 182 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 C12orf77C9JDV5 145 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 DMRTC2Q8IXT2 367 aaPredicted RBP10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 CGAP01215 116 aa10.05□□□□□ -0.8
SLC6A6-204ENST00000613060 OR9G9P0C7N8 305 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms