RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 MS4A10Q96PG2 267 aa10.05□□□□□ -0.8
PRKN-210ENST00000612540 SERTAD4Q9NUC0 356 aa10.05□□□□□ -0.8
PRKN-210ENST00000612540 ZNF580Q9UK33 172 aa10.05□□□□□ -0.8
PRKN-210ENST00000612540 TENM1Q9UKZ4 2725 aa10.05□□□□□ -0.8
PRKN-210ENST00000612540 IGHV3-21A0A0B4J1V1 117 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 SOX15O60248 233 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 OR2J3O76001 311 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TRGV3P03979 118 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 CRYGCP07315 174 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 MFAP2P55001 183 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TPPP2P59282 170 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 EWSR1Q01844 656 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRKN-210ENST00000612540 BSXQ3C1V8 233 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TMEM252Q8N6L7 170 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 KLHDC1Q8N7A1 406 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TMEM217Q8N7C4 229 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.04□□□□□ -0.8
PRKN-210ENST00000612540 OR11H4Q8NGC9 324 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 TNFSF18Q9UNG2 199 aa10.04□□□□□ -0.8
PRKN-210ENST00000612540 BOLA2-SMG1P6H3BVE0 249 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 CORTO00230 105 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 HKR1P10072 659 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 HIST1H1BP16401 226 aaKnown RBP10.03□□□□□ -0.8
PRKN-210ENST00000612540 MDKP21741 143 aaPredicted RBP10.03□□□□□ -0.8
PRKN-210ENST00000612540 OPRK1P41145 380 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
PRKN-210ENST00000612540 SULT1A1P50225 295 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 ATP5IP56385 69 aaPredicted RBP10.03□□□□□ -0.8
PRKN-210ENST00000612540 RHOGP84095 191 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 SLC38A11Q08AI6 406 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 TMEM65Q6PI78 240 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 C10orf99Q6UWK7 81 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 LCNL1Q6ZST4 164 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 LILRB2Q8N423 598 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 OR10P1Q8NGE3 313 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 HYLS1Q96M11 299 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 MFFQ9GZY8 342 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 FBXL7Q9UJT9 491 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 HSPB11Q9Y547 144 aa10.03□□□□□ -0.8
PRKN-210ENST00000612540 IGLV11-55A0A075B6I3 123 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 RPS10-NUDT3A0A1W2PQS6 291 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 SMCO3A2RU48 225 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 CLPSL1A2RUU4 121 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 H3BUA1 57 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 SCAF4O95104 1147 aaKnown RBP10.02□□□□□ -0.81
PRKN-210ENST00000612540 HNRNPCP07910 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRKN-210ENST00000612540 PPIFP30405 207 aaKnown RBP10.02□□□□□ -0.81
PRKN-210ENST00000612540 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
PRKN-210ENST00000612540 HBG1P69891 147 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 HBG2P69892 147 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 NHLH2Q02577 135 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 CFHR3Q02985 330 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 BAXQ07812 192 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 EXOSC2Q13868 293 aaKnown RBP10.02□□□□□ -0.81
PRKN-210ENST00000612540 CLINT1Q14677 625 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 KHDC1LQ5JSQ8 128 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 C12orf54Q6X4T0 127 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 ACOT7LQ6ZUV0 252 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 OR4X2Q8NGF9 303 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 OR1S2Q8NGQ3 325 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 RNASEH2CQ8TDP1 164 aaKnown RBP10.02□□□□□ -0.81
PRKN-210ENST00000612540 FANCD2OSQ96PS1 177 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 AQP10Q96PS8 301 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 SMIM3Q9BZL3 60 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 THYN1Q9P016 225 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 DMRT1Q9Y5R6 373 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 S4R3C0 116 aa10.02□□□□□ -0.81
PRKN-210ENST00000612540 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 HMSDA8MTL9 139 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 NDUFB8O95169 186 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 MT-CO2P00403 227 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 IGHV3-48P01763 117 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 IGHG4P01861 327 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 FOXE3Q13461 319 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 TEX38Q6PEX7 206 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 SLC16A13Q7RTY0 426 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 BSCL2Q96G97 398 aaPredicted RBP10.01□□□□□ -0.81
PRKN-210ENST00000612540 SLC35E1Q96K37 410 aa10.01□□□□□ -0.81
PRKN-210ENST00000612540 FAM223BA6NKX1 122 aa10□□□□□ -0.81
PRKN-210ENST00000612540 IGLV1-40P01703 118 aa10□□□□□ -0.81
PRKN-210ENST00000612540 ELANEP08246 267 aa10□□□□□ -0.81
PRKN-210ENST00000612540 AKR1C1Q04828 323 aa10□□□□□ -0.81
PRKN-210ENST00000612540 ATP5G2Q06055 141 aa10□□□□□ -0.81
PRKN-210ENST00000612540 CD69Q07108 199 aa10□□□□□ -0.81
PRKN-210ENST00000612540 OR2F1Q13607 317 aa10□□□□□ -0.81
PRKN-210ENST00000612540 C15orf32Q32M92 178 aa10□□□□□ -0.81
PRKN-210ENST00000612540 ETFRF1Q6IPR1 90 aa10□□□□□ -0.81
PRKN-210ENST00000612540 ACSM6Q6P461 480 aa10□□□□□ -0.81
PRKN-210ENST00000612540 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
PRKN-210ENST00000612540 COMMD1Q8N668 190 aa10□□□□□ -0.81
PRKN-210ENST00000612540 UBAC2Q8NBM4 344 aa10□□□□□ -0.81
PRKN-210ENST00000612540 NECAP1Q8NC96 275 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms