RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ATP5SQ99766 215 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 TRAV41A0A0B4J266 112 aa13.8□□□□□ -0.2
SREK1-216ENST00000612404 NOL4LQ96MY1 436 aaPredicted RBP13.8□□□□□ -0.2
SREK1-216ENST00000612404 PRSS22Q9GZN4 317 aa13.8□□□□□ -0.2
SREK1-216ENST00000612404 CYTL1Q9NRR1 136 aa13.8□□□□□ -0.2
SREK1-216ENST00000612404 SMCO3A2RU48 225 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 DFFBO76075 338 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 CRYGCP07315 174 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 OPRK1P41145 380 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 AKIRIN2Q53H80 203 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 SLC51BQ86UW2 128 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 BORCS7-ASMTA0A0B4J1R7 106 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 PRSS46E5RG02 174 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 AP4M1O00189 453 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 IGF1P05019 195 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 ZNF266Q14584 549 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 ATP6V1FQ16864 119 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 TMEM95Q3KNT9 176 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 FAM110DQ8TAY7 271 aaPredicted RBP13.79□□□□□ -0.2
SREK1-216ENST00000612404 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
SREK1-216ENST00000612404 TMEM68Q96MH6 324 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 DMRT1Q9Y5R6 373 aa13.79□□□□□ -0.2
SREK1-216ENST00000612404 UBE2L5PA0A1B0GUS4 154 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 FAM181BA6NEQ2 426 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 JTBO76095 146 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 MLANAQ16655 118 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 TMEM147Q9BVK8 224 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 ZNF355PQ9NSJ1 428 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 UQCC1Q9NVA1 299 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 CLDN34H7C241 214 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 IFNA5P01569 189 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 HILS1P60008 231 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
SREK1-216ENST00000612404 TEP1Q99973 2627 aaKnown RBP13.78□□□□□ -0.2
SREK1-216ENST00000612404 IGHV3-21A0A0B4J1V1 117 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 CORTO00230 105 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 CYB5BO43169 146 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 CRLF1O75462 422 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 IGHV3-48P01763 117 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 CRIP2P52943 208 aaPredicted RBP13.77□□□□□ -0.21
SREK1-216ENST00000612404 DLK1P80370 383 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 ZNF702PQ9H963 129 aa13.77□□□□□ -0.21
SREK1-216ENST00000612404 TPT1P13693 172 aaKnown RBP13.76□□□□□ -0.21
SREK1-216ENST00000612404 CD69Q07108 199 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 PVRIGQ6DKI7 326 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 HSD17B11Q8NBQ5 300 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 GGACTQ9BVM4 153 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 FNDC4Q9H6D8 234 aaPredicted RBP13.76□□□□□ -0.21
SREK1-216ENST00000612404 UBA52P62987 128 aaKnown RBP13.76□□□□□ -0.21
SREK1-216ENST00000612404 SLC16A13Q7RTY0 426 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 ST8SIA2Q92186 375 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 FANCD2OSQ96PS1 177 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 GON7Q9BXV9 100 aa13.76□□□□□ -0.21
SREK1-216ENST00000612404 MT-CO2P00403 227 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 GPX4P36969 197 aaPredicted RBP13.75□□□□□ -0.21
SREK1-216ENST00000612404 EIF5AP63241 154 aaKnown RBP13.75□□□□□ -0.21
SREK1-216ENST00000612404 AKR1C1Q04828 323 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 EXOSC2Q13868 293 aaKnown RBP13.75□□□□□ -0.21
SREK1-216ENST00000612404 C19orf54Q5BKX5 351 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 OR2T6Q8NHC8 308 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 SCGB1C1Q8TD33 95 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 SOX15O60248 233 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 CRYBA1P05813 215 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 RNASE1P07998 156 aaKnown RBP13.75□□□□□ -0.21
SREK1-216ENST00000612404 GAMTQ14353 236 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 VWC2Q2TAL6 325 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 BAP18Q8IXM2 172 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 STOML3Q8TAV4 291 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 CACNG8Q8WXS5 425 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
SREK1-216ENST00000612404 ACY3Q96HD9 319 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 SLC35E1Q96K37 410 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 MS4A10Q96PG2 267 aa13.75□□□□□ -0.21
SREK1-216ENST00000612404 RPS10-NUDT3A0A1W2PQS6 291 aa13.74□□□□□ -0.21
SREK1-216ENST00000612404 OR2J3O76001 311 aa13.74□□□□□ -0.21
SREK1-216ENST00000612404 DEFA5Q01523 94 aa13.74□□□□□ -0.21
SREK1-216ENST00000612404 ETFRF1Q6IPR1 90 aa13.74□□□□□ -0.21
SREK1-216ENST00000612404 NPVFQ9HCQ7 196 aa13.74□□□□□ -0.21
SREK1-216ENST00000612404 THYN1Q9P016 225 aa13.74□□□□□ -0.21
SREK1-216ENST00000612404 CFDP00746 253 aaPredicted RBP13.73□□□□□ -0.21
SREK1-216ENST00000612404 FGF7P21781 194 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 TREML4Q6UXN2 200 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 SLA2Q9H6Q3 261 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 I3L2K1 104 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 HIST1H1BP16401 226 aaKnown RBP13.73□□□□□ -0.21
SREK1-216ENST00000612404 RUNX1Q01196 453 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 TEX261Q6UWH6 196 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 WDR61Q9GZS3 305 aaKnown RBP13.73□□□□□ -0.21
SREK1-216ENST00000612404 FBXL7Q9UJT9 491 aa13.73□□□□□ -0.21
SREK1-216ENST00000612404 SETD2Q9BYW2 2564 aaPredicted RBP13.72□□□□□ -0.21
SREK1-216ENST00000612404 K7EIM0 57 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 TCF21O43680 179 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 PPIFP30405 207 aaKnown RBP13.72□□□□□ -0.21
SREK1-216ENST00000612404 IFITM2Q01629 132 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 BTNL8Q6UX41 500 aa13.72□□□□□ -0.21
SREK1-216ENST00000612404 ZNF329Q86UD4 541 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms