RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 OR9G9P0C7N8 305 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 TMEM11P17152 192 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 MDKP21741 143 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-217ENST00000611848 VWC2Q2TAL6 325 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 RPL39P5Q59GN2 51 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 TMEM88Q6PEY1 159 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 LILRB2Q8N423 598 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 OR2T10Q8NGZ9 312 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 OR52E5Q8NH55 327 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 LINC01006Q8NI28 216 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 MBD3L1Q8WWY6 194 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 TAF15Q92804 592 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMAD4-217ENST00000611848 RBMXL1Q96E39 390 aaKnown RBP7.02□□□□□ -1.29
SMAD4-217ENST00000611848 NABP2Q9BQ15 211 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF251Q9BRH9 671 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 RPRMQ9NS64 109 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 PRELID3BQ9Y3B1 194 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 IGHV3-72A0A0B4J1Y9 119 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 TMEM238LA0A1B0GVL6 79 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 MOSP00540 346 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 IGKV1D-33P01593 117 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 IGKV1-33P01594 117 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 THBS3P49746 956 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 SPCS3P61009 180 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 RAB2AP61019 212 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF506Q5JVG8 444 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 CBLN2Q8IUK8 224 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 OR2T6Q8NHC8 308 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 SFT2D1Q8WV19 159 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 PINX1Q96BK5 328 aaKnown RBP7.01□□□□□ -1.29
SMAD4-217ENST00000611848 RHOVQ96L33 236 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 RARRES2Q99969 163 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 RSG1Q9BU20 258 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 TMEM147Q9BVK8 224 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 QTRT1Q9BXR0 403 aaKnown RBP7.01□□□□□ -1.29
SMAD4-217ENST00000611848 MRPL20Q9BYC9 149 aaKnown RBP7.01□□□□□ -1.29
SMAD4-217ENST00000611848 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 MOB4Q9Y3A3 225 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 RNF114Q9Y508 228 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 CEBPZOSA8MTT3 80 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 HSPB1P04792 205 aaKnown RBP7.01□□□□□ -1.29
SMAD4-217ENST00000611848 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
SMAD4-217ENST00000611848 NQO2P16083 231 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 PMS2P11Q13670 270 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 HNF4GQ14541 408 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 ICAM4Q14773 271 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF726P1Q15940 193 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 TMEM41BQ5BJD5 291 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 OR8G2PQ6IF36 304 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF429Q86V71 674 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 Q8N2B8 174 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 C3orf56Q8N813 242 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 OR10P1Q8NGE3 313 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 OR4S2Q8NH73 311 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 ADTRPQ96IZ2 230 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 SMCO4Q9NRQ5 59 aa7.01□□□□□ -1.29
SMAD4-217ENST00000611848 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 ANK2Q01484 3957 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 UBE2L5PA0A1B0GUS4 154 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 A0A1B0GV50 99 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 C15orf62A8K5M9 175 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 IL6RP08887 468 aaPredicted RBP7□□□□□ -1.29
SMAD4-217ENST00000611848 CT45A6P0DMU7 189 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 CT45A5P0DMU8 189 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 CT45A7P0DMV0 189 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 MC5RP33032 325 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 VDAC2P45880 294 aaPredicted RBP7□□□□□ -1.29
SMAD4-217ENST00000611848 ERVK-16P61578 105 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 BLCAPP62952 87 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 POU2AF1Q16633 256 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 FBLN7Q53RD9 439 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 KHDC3LQ587J8 217 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 Q8N6K4 173 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF383Q8NA42 475 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 OR5AN1Q8NGI8 311 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 OR10G4Q8NGN3 311 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 OR4A16Q8NH70 328 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 RCC1LQ96I51 464 aaKnown RBP7□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF747Q9BV97 191 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 VSIRQ9H7M9 311 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 TUBA4BQ9H853 241 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 ZNF702PQ9H963 129 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 PLXNB1O43157 2135 aa7□□□□□ -1.29
SMAD4-217ENST00000611848 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 COLCA2A8K830 154 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 H0YJW9 148 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 RBMXL2O75526 392 aaKnown RBP6.99□□□□□ -1.29
SMAD4-217ENST00000611848 OR13C7P0DN81 318 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 PROK1P58294 105 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 OR2B8PP59922 312 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 RPP30P78346 268 aaKnown RBP6.99□□□□□ -1.29
SMAD4-217ENST00000611848 RHEBQ15382 184 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 HAGHQ16775 308 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 SOHLH1Q5JUK2 328 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 SAMD5Q5TGI4 173 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 SSX7Q7RTT5 188 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 RNF5Q99942 180 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 AIFM2Q9BRQ8 373 aa6.99□□□□□ -1.29
SMAD4-217ENST00000611848 TMEM140Q9NV12 185 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms