RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 K7EIL1 84 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 K7EIM0 57 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 OR2C1O95371 312 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 HLA-AP01891 365 aaKnown RBP10.89□□□□□ -0.67
HDDC2-209ENST00000609477 SLC25A6P12236 298 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 HTR2BP41595 481 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 HOXA1P49639 335 aaPredicted RBP10.89□□□□□ -0.67
HDDC2-209ENST00000609477 ELLP55199 621 aaPredicted RBP10.89□□□□□ -0.67
HDDC2-209ENST00000609477 NMSQ5H8A3 153 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 PALMDQ9NP74 551 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 A8MWP6 167 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 I3L2K1 104 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 TGOLN2O43493 480 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 SFT2D2O95562 160 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 CSN3P07498 182 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 VAMP1P23763 118 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 GPR183P32249 361 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 MFAP4P55083 255 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 SMCO1Q147U7 214 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 BSXQ3C1V8 233 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 LYZL2Q7Z4W2 148 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 NOXA1Q86UR1 476 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 ZNF436Q9C0F3 470 aaPredicted RBP10.88□□□□□ -0.67
HDDC2-209ENST00000609477 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 S4R3C0 116 aa10.88□□□□□ -0.67
HDDC2-209ENST00000609477 LYRM1O43325 122 aa10.87□□□□□ -0.67
HDDC2-209ENST00000609477 ATP5IP56385 69 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-209ENST00000609477 PPP1R1AQ13522 171 aa10.87□□□□□ -0.67
HDDC2-209ENST00000609477 MARC2Q969Z3 335 aa10.87□□□□□ -0.67
HDDC2-209ENST00000609477 MISP3Q96FF7 219 aa10.87□□□□□ -0.67
HDDC2-209ENST00000609477 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
HDDC2-209ENST00000609477 HIPK2Q9H2X6 1198 aa10.87□□□□□ -0.67
HDDC2-209ENST00000609477 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
HDDC2-209ENST00000609477 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
HDDC2-209ENST00000609477 FAM90A26D6RGX4 464 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 NDUFA4O00483 81 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 PLA2G10O15496 165 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 NUPL2O15504 423 aaKnown RBP10.86□□□□□ -0.67
HDDC2-209ENST00000609477 MT-CO2P00403 227 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 RNASE2P10153 161 aaKnown RBP10.86□□□□□ -0.67
HDDC2-209ENST00000609477 GP9P14770 177 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 BTCP35070 178 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 NPBWR1P48145 328 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 RELQ04864 619 aaPredicted RBP10.86□□□□□ -0.67
HDDC2-209ENST00000609477 TNFRSF9Q07011 255 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 C2orf83Q53S99 150 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 DEFB121Q5J5C9 76 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 LCN12Q6JVE5 192 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 DUSP18Q8NEJ0 188 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 HEYLQ9NQ87 328 aaPredicted RBP10.86□□□□□ -0.67
HDDC2-209ENST00000609477 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 LSM4Q9Y4Z0 139 aaKnown RBP10.86□□□□□ -0.67
HDDC2-209ENST00000609477 U3KQ87 197 aa10.86□□□□□ -0.67
HDDC2-209ENST00000609477 SORL1Q92673 2214 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 LINC00854A0A1B0GVQ3 168 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 ZNF320A2RRD8 509 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 C9orf170A2RU37 121 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 C2orf70A6NJV1 201 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 CEBPZOSA8MTT3 80 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 F8W735 103 aaPredicted RBP10.85□□□□□ -0.67
HDDC2-209ENST00000609477 SCGB2A1O75556 95 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 CTSGP08311 255 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 OR4E1P0C645 316 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 FOLR2P14207 255 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 SPNP16150 400 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 ANKRD55Q3KP44 614 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 Q56UQ5 140 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 SPINK9Q5DT21 86 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 RNASEH2CQ8TDP1 164 aaKnown RBP10.85□□□□□ -0.67
HDDC2-209ENST00000609477 PRR13Q9NZ81 148 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 TGP01266 2768 aa10.85□□□□□ -0.67
HDDC2-209ENST00000609477 RPS10-NUDT3A0A1W2PQS6 291 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 K7EMT4 169 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 GNG7O60262 68 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 PITX3O75364 302 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 LY86O95711 162 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 C8orf88P0DMB2 117 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 CBLN1P23435 193 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 ZNF846Q147U1 533 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 LYG2Q86SG7 212 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 UBAC2Q8NBM4 344 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 SLC24A4Q8NFF2 622 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 OR1S1Q8NH92 325 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 COQ8AQ8NI60 647 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 PINX1Q96BK5 328 aaKnown RBP10.84□□□□□ -0.67
HDDC2-209ENST00000609477 PRR25Q96S07 402 aa10.84□□□□□ -0.67
HDDC2-209ENST00000609477 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
HDDC2-209ENST00000609477 PRKDCP78527 4128 aaKnown RBP10.83□□□□□ -0.68
HDDC2-209ENST00000609477 IGHV3-21A0A0B4J1V1 117 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 C15orf62A8K5M9 175 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 MED6O75586 246 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 ADMP35318 185 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 DHRS2Q13268 280 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 ETFRF1Q6IPR1 90 aa10.83□□□□□ -0.68
HDDC2-209ENST00000609477 MZT2BQ6NZ67 158 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms