RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CD55P08174 381 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 ATP5IP56385 69 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-205ENST00000609104 PILRBQ9UKJ0 227 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 TM4SF5O14894 197 aa11.02□□□□□ -0.64
USP6NL-205ENST00000609104 TIAF1O95411 115 aa11.02□□□□□ -0.64
USP6NL-205ENST00000609104 NHP2Q9NX24 153 aaKnown RBP11.02□□□□□ -0.64
USP6NL-205ENST00000609104 TBX6O95947 436 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-205ENST00000609104 SERF1AO75920 110 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 RPL23P62829 140 aaKnown RBP11.02□□□□□ -0.65
USP6NL-205ENST00000609104 GNG5P63218 68 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 TAF1LQ8IZX4 1826 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 ZNF257Q9Y2Q1 563 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 A0A087WWC5 75 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 CD7P09564 240 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.65
USP6NL-205ENST00000609104 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 FAM181AQ8N9Y4 354 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 MED12Q93074 2177 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 CFAP161Q6P656 301 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 VKORC1Q9BQB6 163 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 TRAV14DV4A0A0A6YYC5 116 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 CKS1BP61024 79 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 OR2K2Q8NGT1 345 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-205ENST00000609104 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 Q6ZT83 130 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 HELZP42694 1942 aaKnown RBP11.01□□□□□ -0.65
USP6NL-205ENST00000609104 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 C12orf77C9JDV5 145 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 GLRXP35754 106 aa11.01□□□□□ -0.65
USP6NL-205ENST00000609104 C21orf62Q9NYP8 219 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 LOC285556D6RIA3 1793 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 SAP25Q8TEE9 199 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 C5orf30Q96GV9 206 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 SBF1O95248 1867 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 FBLN7Q53RD9 439 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 DPM3Q9P2X0 92 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 RFPL3SP0C7P2 107 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 SRSF3P84103 164 aaKnown RBP11□□□□□ -0.65
USP6NL-205ENST00000609104 OSR1Q8TAX0 266 aaPredicted RBP11□□□□□ -0.65
USP6NL-205ENST00000609104 IGKV1D-43A0A0B4J1Z2 117 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 ZNF585BQ52M93 769 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 TIMM23BQ5SRD1 257 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 RNF182Q8N6D2 247 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 GDF15Q99988 308 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 IGHV3-64A0A075B6Q5 118 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 FAM27E3Q08E93 113 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 MRPL20Q9BYC9 149 aaKnown RBP11□□□□□ -0.65
USP6NL-205ENST00000609104 A0A0G2JLM5 398 aa11□□□□□ -0.65
USP6NL-205ENST00000609104 LAIR2Q6ISS4 152 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 PAX1P15863 534 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 ANAPC13Q9BS18 74 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 SHISA3A0PJX4 238 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 A8MXK9 166 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 STHQ8IWL8 128 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 TMEM42Q69YG0 159 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 GTF3C1Q12789 2109 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 PPIFP30405 207 aaKnown RBP10.99□□□□□ -0.65
USP6NL-205ENST00000609104 ABCA1O95477 2261 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 BSPH1Q075Z2 132 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 A0A0G2JK05 382 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 DPM2O94777 84 aa10.99□□□□□ -0.65
USP6NL-205ENST00000609104 PHLDA1Q8WV24 401 aaPredicted RBP10.98□□□□□ -0.65
USP6NL-205ENST00000609104 C18orf12Q96KH6 178 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 KIR3DL3Q8N743 410 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 LINC00587B1AMM8 73 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 SRD5A1P18405 259 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 FAM89BQ8N5H3 189 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 KBTBD11-OT1A0A1B0GTJ5 212 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 RAMP3O60896 148 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 CECR9P0C854 216 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 PRB4P10163 310 aaPredicted RBP10.98□□□□□ -0.65
USP6NL-205ENST00000609104 UCP1P25874 307 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 IFI27P40305 119 aaPredicted RBP10.98□□□□□ -0.65
USP6NL-205ENST00000609104 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 CELA3AP09093 270 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 Q6AWC8 147 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 OR13A1Q8NGR1 328 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 SLC25A15Q9Y619 301 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 A0A1B0GW15 77 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 SRSF6Q13247 344 aaKnown RBP10.98□□□□□ -0.65
USP6NL-205ENST00000609104 SIGMAR1Q99720 223 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 RNF126Q9BV68 326 aa10.98□□□□□ -0.65
USP6NL-205ENST00000609104 C1QTNF9P0C862 333 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.657e-7■■□□□ 13.1
USP6NL-205ENST00000609104 ZNF525Q8N782 197 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 CFHR5Q9BXR6 569 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 OTORQ9NRC9 128 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 IGHV3-11P01762 117 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms