RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	MT-CO2	P00403	227 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	IGKV1-39	P01597	117 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	PMP2	P02689	132 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	IGKV1D-39	P04432	117 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	CD5	P06127	495 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	TCF24	Q7RTU0	167 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805		Q8NAQ8	132 aa		15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	YTHDF1	Q9BYJ9	559 aa	Known RBP	15.31	■□□□□ 0.04
NECAB3-222	ENST00000607805	CA1	P00915	261 aa	Predicted RBP	15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	IGHV3-48	P01763	117 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	APOH	P02749	345 aa	Predicted RBP	15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	GIG44	P09565	113 aa	Predicted RBP	15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	PRCD	Q00LT1	54 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	TOMM20L	Q6UXN7	152 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	LYSMD2	Q8IV50	215 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	ST8SIA2	Q92186	375 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	MISP3	Q96FF7	219 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	CMTM3	Q96MX0	182 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	MS4A6A	Q9H2W1	248 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	HRH4	Q9H3N8	390 aa		15.3	■□□□□ 0.04
NECAB3-222	ENST00000607805	TRAV2	A0A0B4J234	112 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	DFFB	O76075	338 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	TAS2R46	P59540	309 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	TMEM187	Q14656	261 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	FAM24B	Q8N5W8	94 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	OR5H2	Q8NGV7	314 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	S100A16	Q96FQ6	103 aa	Known RBP	15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	ZFAND3	Q9H8U3	227 aa		15.29	■□□□□ 0.04
NECAB3-222	ENST00000607805	TAS2R20	P59543	309 aa		15.28	■□□□□ 0.04
NECAB3-222	ENST00000607805	PAFAH1B2	P68402	229 aa		15.28	■□□□□ 0.04
NECAB3-222	ENST00000607805	TSPAN14	Q8NG11	270 aa		15.28	■□□□□ 0.04
NECAB3-222	ENST00000607805	OR6F1	Q8NGZ6	308 aa		15.28	■□□□□ 0.04
NECAB3-222	ENST00000607805	GINS3	Q9BRX5	216 aa		15.28	■□□□□ 0.04
NECAB3-222	ENST00000607805	GNG7	O60262	68 aa		15.27	■□□□□ 0.04
NECAB3-222	ENST00000607805	DEFB131A	P59861	70 aa		15.27	■□□□□ 0.04
NECAB3-222	ENST00000607805	HSPE1	P61604	102 aa	Known RBP	15.27	■□□□□ 0.04
NECAB3-222	ENST00000607805	UBE2NL	Q5JXB2	153 aa		15.27	■□□□□ 0.04
NECAB3-222	ENST00000607805	LEMD1	Q68G75	181 aa		15.27	■□□□□ 0.04
NECAB3-222	ENST00000607805	PVRIG	Q6DKI7	326 aa		15.27	■□□□□ 0.04
NECAB3-222	ENST00000607805	C11orf94	C9JXX5	98 aa		15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	RBMY1A1	P0DJD3	496 aa	Known RBP	15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	RBMY1C	P0DJD4	496 aa		15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	HRH1	P35367	487 aa		15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	TGFBR1	P36897	503 aa		15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	RBMY1F	Q15415	496 aa	Known RBP	15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	PHLDA2	Q53GA4	152 aa		15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	OR4A16	Q8NH70	328 aa		15.26	■□□□□ 0.03
NECAB3-222	ENST00000607805	ST8SIA3	O43173	380 aa		15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	TMEM69	Q5SWH9	247 aa		15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	H2BFWT	Q7Z2G1	175 aa		15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	TBC1D26	Q86UD7	250 aa		15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	CROCCP3	Q8IVE0	287 aa		15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	DUSP18	Q8NEJ0	188 aa		15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	PINX1	Q96BK5	328 aa	Known RBP	15.25	■□□□□ 0.03
NECAB3-222	ENST00000607805	PUS1	Q9Y606	427 aa	Known RBP eCLIP	15.25	■□□□□ 0.03	1e-5	■■■■■ 49.7
NECAB3-222	ENST00000607805		A0A1B0GU03	582 aa		15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	IGLL5	B9A064	214 aa		15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	INS-IGF2	F8WCM5	200 aa		15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	DNASE2	O00115	360 aa	Predicted RBP	15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	ZNF600	Q6ZNG1	722 aa		15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	TRPT1	Q86TN4	253 aa	Known RBP	15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	GPX8	Q8TED1	209 aa		15.24	■□□□□ 0.03
NECAB3-222	ENST00000607805	IGHV4-28	A0A0C4DH34	117 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	ZNF705E	A8MWA4	302 aa	Predicted RBP	15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	TMEM50A	O95807	157 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	EIF4E	P06730	217 aa	Known RBP	15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805		P0C879	139 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	HLA-DMA	P28067	261 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	PRSS3	P35030	304 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	RPS19	P39019	145 aa	Known RBP	15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	NPBWR1	P48145	328 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	UCP3	P55916	312 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	ERH	P84090	104 aa	Known RBP	15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	LPCAT3	Q6P1A2	487 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	SAMD12	Q8N8I0	201 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	MRGPRF	Q96AM1	343 aa		15.23	■□□□□ 0.03
NECAB3-222	ENST00000607805	IGHV3-66	A0A0C4DH42	116 aa		15.22	■□□□□ 0.03
NECAB3-222	ENST00000607805		K7EQG2	157 aa		15.22	■□□□□ 0.03
NECAB3-222	ENST00000607805	STH	Q8IWL8	128 aa		15.22	■□□□□ 0.03
NECAB3-222	ENST00000607805		X6R8D5	127 aa		15.22	■□□□□ 0.03
NECAB3-222	ENST00000607805		A0A1B0GVY2	172 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	MIF	P14174	115 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	HLA-DMB	P28068	263 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	NEDD8	Q15843	81 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	IZUMO4	Q1ZYL8	232 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	TMEM41B	Q5BJD5	291 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	CSNK1G2-AS1	Q8NCQ2	148 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	GRAMD2B	Q96HH9	432 aa		15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	MRPL36	Q9P0J6	103 aa	Known RBP	15.21	■□□□□ 0.03
NECAB3-222	ENST00000607805	ABCA13	Q86UQ4	5058 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	ELOA3C	A0A087WX78	387 aa	Predicted RBP	15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	ATP6V1G2	O95670	118 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	IGKV1-5	P01602	117 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	C4BPB	P20851	252 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	CRYBB3	P26998	211 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	S100G	P29377	79 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805	SPINK9	Q5DT21	86 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805		Q6ZTC4	211 aa		15.2	■□□□□ 0.02
NECAB3-222	ENST00000607805		A0A0B4J293	547 aa		15.19	■□□□□ 0.02
NECAB3-222	ENST00000607805	RNASE2	P10153	161 aa	Known RBP	15.19	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms