RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
SHROOM1-207ENST00000606676 ZNF436Q9C0F3 470 aaPredicted RBP9.69□□□□□ -0.86
SHROOM1-207ENST00000606676 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
SHROOM1-207ENST00000606676 IGHV3-35A0A0C4DH35 117 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 ZNF320A2RRD8 509 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 MT-CO2P00403 227 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 IGHV3-48P01763 117 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 CTSGP08311 255 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 RNASE2P10153 161 aaKnown RBP9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 CBLN1P23435 193 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 FCGR2BP31994 310 aaPredicted RBP9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 CCR6P51684 374 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 SPCS3P61009 180 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 DEFB114Q30KQ6 69 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 BSXQ3C1V8 233 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 NMSQ5H8A3 153 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 TRIQKQ629K1 86 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 CACNG8Q8WXS5 425 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 MISP3Q96FF7 219 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 PDCD10Q9BUL8 212 aa9.68□□□□□ -0.86
SHROOM1-207ENST00000606676 A0A0B4J2A0 478 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 A6NHS1 94 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 SNCAP37840 140 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 HOXA1P49639 335 aaPredicted RBP9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 CD69Q07108 199 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 CD300EQ496F6 205 aaPredicted RBP9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 UBAC2Q8NBM4 344 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 SHPKQ9UHJ6 478 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 SMAD5-AS1Q9Y6J3 95 aa9.67□□□□□ -0.86
SHROOM1-207ENST00000606676 LINC00854A0A1B0GVQ3 168 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 NAP1L6A6NFF2 107 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 ZNF785A8K8V0 405 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 C8orf88P0DMB2 117 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 SULT1A3P0DMM9 295 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 SULT1A4P0DMN0 295 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 ANXA3P12429 323 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 IL7P13232 177 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 BTCP35070 178 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 MFAP4P55083 255 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 SRPXP78539 464 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 RBMS2Q15434 407 aaKnown RBP9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 ANKRD55Q3KP44 614 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 Q56UQ5 140 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 LGI3Q8N145 548 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 UXS1Q8NBZ7 420 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 OR2K2Q8NGT1 345 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 PINX1Q96BK5 328 aaKnown RBP9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 TXN2Q99757 166 aa9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 TECRQ9NZ01 308 aaKnown RBP9.66□□□□□ -0.86
SHROOM1-207ENST00000606676 NDUFA4O00483 81 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 NDUFB6O95139 128 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 VAMP1P23763 118 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 INPP1P49441 399 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 ELLP55199 621 aaPredicted RBP9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 CNPY1Q3B7I2 92 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 C11orf87Q6NUJ2 197 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 CENPSQ8N2Z9 138 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 LRTM2Q8N967 370 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 TMEM170AQ8WVE7 144 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 FNDC4Q9H6D8 234 aaPredicted RBP9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 PALMDQ9NP74 551 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 ENY2Q9NPA8 101 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 HEYLQ9NQ87 328 aaPredicted RBP9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 MLXQ9UH92 298 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 FLVCR2Q9UPI3 526 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 UFC1Q9Y3C8 167 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 SELENOKQ9Y6D0 94 aa9.65□□□□□ -0.86
SHROOM1-207ENST00000606676 CEBPZOSA8MTT3 80 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 PLA2G10O15496 165 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 NXPH3O95157 252 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 SFT2D2O95562 160 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 HTR2BP41595 481 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 SMCO1Q147U7 214 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 MLANAQ16655 118 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 MRPL36Q9P0J6 103 aaKnown RBP9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 MRPL27Q9P0M9 148 aaKnown RBP9.64□□□□□ -0.87
SHROOM1-207ENST00000606676 IGHV3OR16-8A0A075B7F1 116 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 A0A1B0GU03 582 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 DUXBA0A1W2PPF3 345 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 A8MZ25 164 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 K7EMT4 169 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 CORTO00230 105 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 NUPL2O15504 423 aaKnown RBP9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 PITX3O75364 302 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 FRMD6-AS1P0C7T7 363 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 IGHV4-30-4P0DP06 118 aa9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 UBE2MP61081 183 aaKnown RBP9.63□□□□□ -0.87
SHROOM1-207ENST00000606676 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms