RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZNF114Q8NC26 417 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 PHLDA1Q8WV24 401 aaPredicted RBP9.68□□□□□ -0.86
RPS28-204ENST00000602140 MRGPRFQ96AM1 343 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 CMTM3Q96MX0 182 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 UCP3P55916 312 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 ERHP84090 104 aaKnown RBP9.67□□□□□ -0.86
RPS28-204ENST00000602140 IZUMO4Q1ZYL8 232 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 SPINK9Q5DT21 86 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 TCF24Q7RTU0 167 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 GATAD1Q8WUU5 269 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 RARRES2Q99969 163 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 SCPEP1Q9HB40 452 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 VCX3AQ9NNX9 186 aa9.67□□□□□ -0.86
RPS28-204ENST00000602140 APOA1P02647 267 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 RCVRNP35243 200 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 TOMM20LQ6UXN7 152 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
RPS28-204ENST00000602140 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 GINS3Q9BRX5 216 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 FRAS1Q86XX4 4008 aa9.66□□□□□ -0.86
RPS28-204ENST00000602140 IGHV3-66A0A0C4DH42 116 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 M0QYG6 137 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 ST8SIA3O43173 380 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 APOHP02749 345 aaPredicted RBP9.65□□□□□ -0.86
RPS28-204ENST00000602140 ELK1P19419 428 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
RPS28-204ENST00000602140 NCS1P62166 190 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 LILRB2Q8N423 598 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 DUSP18Q8NEJ0 188 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 VSIRQ9H7M9 311 aa9.65□□□□□ -0.86
RPS28-204ENST00000602140 A0A087WXM4 84 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 DNASE2O00115 360 aaPredicted RBP9.64□□□□□ -0.87
RPS28-204ENST00000602140 HPGDSO60760 199 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 DEDDO75618 318 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 DFFBO76075 338 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 CA1P00915 261 aaPredicted RBP9.64□□□□□ -0.87
RPS28-204ENST00000602140 CD5P06127 495 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 PGAM2P15259 253 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 PI3P19957 117 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 SNCAP37840 140 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 NPBWR1P48145 328 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 DEFB131AP59861 70 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 RPL11P62913 178 aaKnown RBP9.64□□□□□ -0.87
RPS28-204ENST00000602140 RNASE12Q5GAN4 147 aaKnown RBP9.64□□□□□ -0.87
RPS28-204ENST00000602140 LGALS9CQ6DKI2 356 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 ZNF600Q6ZNG1 722 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 SLC35G3Q8N808 338 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 MS4A6AQ9H2W1 248 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 ZFAND3Q9H8U3 227 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 FBXL17Q9UF56 701 aa9.64□□□□□ -0.87
RPS28-204ENST00000602140 PUS1Q9Y606 427 aaKnown RBP eCLIP9.64□□□□□ -0.87
RPS28-204ENST00000602140 A0A0B4J293 547 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 TMEM50AO95807 157 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 IFNA17P01571 189 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 IGKV1-5P01602 117 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 AKR1C2P52895 323 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 PIGPP57054 158 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 RND3P61587 244 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 VBP1P61758 197 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 RBMS2Q15434 407 aaKnown RBP9.63□□□□□ -0.87
RPS28-204ENST00000602140 LEMD1Q68G75 181 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 FUNDC2Q9BWH2 189 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 MFFQ9GZY8 342 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
RPS28-204ENST00000602140 KMT2AQ03164 3969 aa9.63□□□□□ -0.87
RPS28-204ENST00000602140 A0A1B0GU03 582 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 INS-IGF2F8WCM5 200 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 DEFB4AO15263 64 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 TNFAIP8O95379 198 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 IFNA4P05014 189 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 P0C879 139 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 TMEM187Q14656 261 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 RNASE10Q5GAN6 216 aaKnown RBP9.62□□□□□ -0.87
RPS28-204ENST00000602140 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 FAM24BQ8N5W8 94 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 ZNF486Q96H40 463 aaPredicted RBP9.62□□□□□ -0.87
RPS28-204ENST00000602140 PDCD10Q9BUL8 212 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 KLK11Q9UBX7 282 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 RABAC1Q9UI14 185 aa9.62□□□□□ -0.87
RPS28-204ENST00000602140 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 C3orf85A0A1B0GTC6 90 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 FAM25AB3EWG3 89 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 FAM25CB3EWG5 89 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 FAM25GB3EWG6 89 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 CD3DP04234 171 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
RPS28-204ENST00000602140 NPPCP23582 126 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 ETV6P41212 452 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 SUB1P53999 127 aaKnown RBP eCLIP9.61□□□□□ -0.87
RPS28-204ENST00000602140 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 STHQ8IWL8 128 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
RPS28-204ENST00000602140 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
RPS28-204ENST00000602140 CORTO00230 105 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 ATG12O94817 140 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 OPRK1P41145 380 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms