RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TEX50A0A1B0GTY4 177 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 MFSD2BA6NFX1 497 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
UPF1-213ENST00000601981 NUDT19A8MXV4 375 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 UMAD1C9J7I0 102 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 INS-IGF2F8WCM5 200 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 AP4M1O00189 453 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 SLC25A17O43808 307 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 ACTL6BO94805 426 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 IFNA10P01566 189 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 HLA-DRB1P01911 266 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 MDKP21741 143 aaPredicted RBP7.97□□□□□ -1.13
UPF1-213ENST00000601981 RAB11AP62491 216 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 BLCAPP62952 87 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 VWC2Q2TAL6 325 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 FBLN7Q53RD9 439 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 AWAT1Q58HT5 328 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 OR8G2PQ6IF36 304 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 SLC25A24Q6NUK1 477 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 HSD17B13Q7Z5P4 300 aaPredicted RBP7.97□□□□□ -1.13
UPF1-213ENST00000601981 EIF4E3Q8N5X7 224 aaKnown RBP7.97□□□□□ -1.13
UPF1-213ENST00000601981 C3orf56Q8N813 242 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 OR1L8Q8NGR8 309 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 SCGB1C1Q8TD33 95 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 PSMG3Q9BT73 122 aaPredicted RBP7.97□□□□□ -1.13
UPF1-213ENST00000601981 GGACTQ9BVM4 153 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 SH3BGRL3Q9H299 93 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 FBXL15Q9H469 300 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 PLEKHA3Q9HB20 300 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 PARP11Q9NR21 331 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 UQCC1Q9NVA1 299 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
UPF1-213ENST00000601981 A0A1W2PN81 502 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 ANKRD34BA5PLL1 514 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 IGHG2P01859 326 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 AMY1AP04745 511 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 CRYGBP07316 175 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 NPY1RP25929 384 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 CNTFRP26992 372 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 MAS1LP35410 378 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 CHRNA7P36544 502 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 SLC35B1P78383 322 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 PPP1R27Q86WC6 154 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 MMD2Q8IY49 270 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 SLC24A4Q8NFF2 622 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 OR2G3Q8NGZ4 309 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 ABHD5Q8WTS1 349 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 RITA1Q96K30 269 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 FAM210AQ96ND0 272 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 COMMD5Q9GZQ3 224 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 WDR61Q9GZS3 305 aaKnown RBP7.96□□□□□ -1.14
UPF1-213ENST00000601981 ZNF430Q9H8G1 570 aaPredicted RBP7.96□□□□□ -1.14
UPF1-213ENST00000601981 NDUFA4L2Q9NRX3 87 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 SIGLEC9Q9Y336 463 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 TIMM9Q9Y5J7 89 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 TNCP24821 2201 aa7.96□□□□□ -1.14
UPF1-213ENST00000601981 UBE2L5PA0A1B0GUS4 154 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 RAB19A4D1S5 217 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 SH2D7A6NKC9 451 aaPredicted RBP7.95□□□□□ -1.14
UPF1-213ENST00000601981 PRSS46E5RG02 174 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 CNIH1O95406 144 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 MYOD1P15172 320 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 DLK1P80370 383 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 RUNX1Q01196 453 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 PRSS8Q16651 343 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 BSXQ3C1V8 233 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 PXDC1Q5TGL8 231 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 ZNF562Q6V9R5 426 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 DPPA3Q6W0C5 159 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 IL34Q6ZMJ4 242 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 ETV3LQ6ZN32 361 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
UPF1-213ENST00000601981 Q6ZRG5 221 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 CENPVQ7Z7K6 275 aaPredicted RBP7.95□□□□□ -1.14
UPF1-213ENST00000601981 KLHDC1Q8N7A1 406 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 TMEM170AQ8WVE7 144 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 TAF15Q92804 592 aaKnown RBP eCLIP7.95□□□□□ -1.14
UPF1-213ENST00000601981 RBMXL1Q96E39 390 aaKnown RBP7.95□□□□□ -1.14
UPF1-213ENST00000601981 HINT2Q9BX68 163 aa7.95□□□□□ -1.14
UPF1-213ENST00000601981 TET2Q6N021 2002 aaPredicted RBP7.95□□□□□ -1.14
UPF1-213ENST00000601981 PSMB11A5LHX3 300 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 FNDC10F2Z333 226 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 CA2P00918 260 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 PRH1P02810 166 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 CAMLGP49069 296 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 PROK1P58294 105 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 GNB1P62873 340 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 SERF2P84101 59 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 MRGPRG-AS1Q2M3A8 158 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 C2orf83Q53S99 150 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 BTNL8Q6UX41 500 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
UPF1-213ENST00000601981 OR4X2Q8NGF9 303 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 LYPD6BQ8NI32 183 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 ARPC1AQ92747 370 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 MARC2Q969Z3 335 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 HSPB9Q9BQS6 159 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 SERTAD4Q9NUC0 356 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms