RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 C8orf88P0DMB2 117 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 PYDC2Q56P42 97 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 RNASE11Q8TAA1 199 aaKnown RBP12.98□□□□□ -0.33
HERC3-214ENST00000601319 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 IL22RA2Q969J5 263 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 TMEM230Q96A57 120 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 TXN2Q99757 166 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 TMEM56-RWDD3S4R434 201 aa12.98□□□□□ -0.33
HERC3-214ENST00000601319 IFNA17P01571 189 aa12.97□□□□□ -0.33
HERC3-214ENST00000601319 SBSPONQ8IVN8 264 aa12.97□□□□□ -0.33
HERC3-214ENST00000601319 ASCL2Q99929 193 aa12.97□□□□□ -0.33
HERC3-214ENST00000601319 ZNF785A8K8V0 405 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 CORTO00230 105 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 NDUFA4O00483 81 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 ADMP35318 185 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 SNCAP37840 140 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 SPANXN2Q5MJ10 180 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 TMEM268Q5VZI3 342 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 Q6ZRM9 215 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 SELENOHQ8IZQ5 122 aaKnown RBP12.96□□□□□ -0.33
HERC3-214ENST00000601319 TOMM5Q8N4H5 51 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 OR52E5Q8NH55 327 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 MISP3Q96FF7 219 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 WWC2-AS2Q96NR7 200 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 CHRDL1Q9BU40 450 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 DAZ1Q9NQZ3 744 aaKnown RBP12.96□□□□□ -0.33
HERC3-214ENST00000601319 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.96□□□□□ -0.33
HERC3-214ENST00000601319 MRPL27Q9P0M9 148 aaKnown RBP12.96□□□□□ -0.33
HERC3-214ENST00000601319 MLXQ9UH92 298 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 KCNIP3Q9Y2W7 256 aa12.96□□□□□ -0.33
HERC3-214ENST00000601319 IGHV3-21A0A0B4J1V1 117 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 MT-CO2P00403 227 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 CTSGP08311 255 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 HOXA1P49639 335 aaPredicted RBP12.95□□□□□ -0.34
HERC3-214ENST00000601319 MFAP4P55083 255 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 SPCS3P61009 180 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 SRPXP78539 464 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 TMEM187Q14656 261 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 BSXQ3C1V8 233 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 TM4SF20Q53R12 229 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 Q56UQ5 140 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 SPINK9Q5DT21 86 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 ZNF57Q68EA5 555 aaPredicted RBP12.95□□□□□ -0.34
HERC3-214ENST00000601319 TMEM61Q8N0U2 210 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 UBAC2Q8NBM4 344 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 CACFD1Q9UGQ2 172 aa12.95□□□□□ -0.34
HERC3-214ENST00000601319 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 PIGBOS1A0A0B4J2F0 54 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 IGHV3-35A0A0C4DH35 117 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 NUPL2O15504 423 aaKnown RBP12.94□□□□□ -0.34
HERC3-214ENST00000601319 RNASE2P10153 161 aaKnown RBP12.94□□□□□ -0.34
HERC3-214ENST00000601319 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.34
HERC3-214ENST00000601319 CD81P60033 236 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 SUPT4H1P63272 117 aaKnown RBP12.94□□□□□ -0.34
HERC3-214ENST00000601319 RELQ04864 619 aaPredicted RBP12.94□□□□□ -0.34
HERC3-214ENST00000601319 BTNL8Q6UX41 500 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 ZNF414Q96IQ9 312 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 ENY2Q9NPA8 101 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 CACNG5Q9UF02 275 aa12.94□□□□□ -0.34
HERC3-214ENST00000601319 C15orf62A8K5M9 175 aa12.93□□□□□ -0.34
HERC3-214ENST00000601319 K7EMT4 169 aa12.93□□□□□ -0.34
HERC3-214ENST00000601319 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
HERC3-214ENST00000601319 WDR89Q96FK6 387 aaPredicted RBP12.93□□□□□ -0.34
HERC3-214ENST00000601319 SLC25A21Q9BQT8 299 aaPredicted RBP12.93□□□□□ -0.34
HERC3-214ENST00000601319 NEURL2Q9BR09 285 aa12.93□□□□□ -0.34
HERC3-214ENST00000601319 NDUFA13Q9P0J0 144 aa12.93□□□□□ -0.34
HERC3-214ENST00000601319 A0A0B4J2A0 478 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 ANXA3P12429 323 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 AKR1C4P17516 323 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 GUCA2BQ16661 112 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 NMSQ5H8A3 153 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 NBEAL2Q6ZNJ1 2754 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
HERC3-214ENST00000601319 SHPKQ9UHJ6 478 aa12.92□□□□□ -0.34
HERC3-214ENST00000601319 HUWE1Q7Z6Z7 4374 aaKnown RBP12.92□□□□□ -0.34
HERC3-214ENST00000601319 GNG7O60262 68 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 SULT1A3P0DMM9 295 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 SULT1A4P0DMN0 295 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 HTR2BP41595 481 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 NPBWR1P48145 328 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 ANKRD55Q3KP44 614 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 TMEM128Q5BJH2 165 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 SLC16A13Q7RTY0 426 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 OR10C1Q96KK4 312 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
HERC3-214ENST00000601319 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
HERC3-214ENST00000601319 CD7P09564 240 aa12.9□□□□□ -0.34
HERC3-214ENST00000601319 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
HERC3-214ENST00000601319 LGI3Q8N145 548 aa12.9□□□□□ -0.34
HERC3-214ENST00000601319 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
HERC3-214ENST00000601319 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
HERC3-214ENST00000601319 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
HERC3-214ENST00000601319 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
HERC3-214ENST00000601319 CCR6P51684 374 aa12.89□□□□□ -0.35
HERC3-214ENST00000601319 SMCO1Q147U7 214 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms