RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 MRGPRFQ96AM1 343 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 RARRES2Q99969 163 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 C6orf62Q9GZU0 229 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
CHMP2A-208ENST00000601220 HERC2O95714 4834 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 IGKV3-7A0A075B6H7 116 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 P0C879 139 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 TSPAN5P62079 268 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 IZUMO4Q1ZYL8 232 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 LGALS9CQ6DKI2 356 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 ST8SIA2Q92186 375 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 CMTM3Q96MX0 182 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 SCPEP1Q9HB40 452 aa13.17□□□□□ -0.3
CHMP2A-208ENST00000601220 INS-IGF2F8WCM5 200 aa13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 DEDDO75618 318 aa13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 IGKV1-5P01602 117 aa13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 KRTAP17-1Q9BYP8 105 aa13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 C11orf68Q9H3H3 251 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
CHMP2A-208ENST00000601220 A0A0B4J293 547 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 GNG7O60262 68 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 APOA1P02647 267 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 S100GP29377 79 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 RCVRNP35243 200 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 ERHP84090 104 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 SPINK9Q5DT21 86 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 OR11H2Q8NH07 326 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
CHMP2A-208ENST00000601220 HECTD4Q9Y4D8 3996 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 A0A1B0GU03 582 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 DFFBO76075 338 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 TMEM50AO95807 157 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 CD5P06127 495 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 ELK1P19419 428 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 RND3P61587 244 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 NCS1P62166 190 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
CHMP2A-208ENST00000601220 DNAH6Q9C0G6 4158 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 M0QYG6 137 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 GIG44P09565 113 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 C11orf45Q8TAV5 145 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 PUS1Q9Y606 427 aaKnown RBP eCLIP13.13□□□□□ -0.31
CHMP2A-208ENST00000601220 A0A087WXM4 84 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 HPGDSO60760 199 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 CA1P00915 261 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 NPBWR1P48145 328 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 DEFB131AP59861 70 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 PRR20EP86478 221 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 PRR20CP86479 221 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 PRR20DP86480 221 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 PRR20BP86481 221 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 PRR20AP86496 221 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 LEMD1Q68G75 181 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
CHMP2A-208ENST00000601220 DEFB4AO15263 64 aa13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 RNASE2P10153 161 aaKnown RBP13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 PI3P19957 117 aa13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 MLANAQ16655 118 aa13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 ZNF486Q96H40 463 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 FUNDC2Q9BWH2 189 aa13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 MFFQ9GZY8 342 aa13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 FNDC4Q9H6D8 234 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
CHMP2A-208ENST00000601220 PIGPP57054 158 aa13.1□□□□□ -0.31
CHMP2A-208ENST00000601220 VBP1P61758 197 aa13.1□□□□□ -0.31
CHMP2A-208ENST00000601220 TMEM187Q14656 261 aa13.1□□□□□ -0.31
CHMP2A-208ENST00000601220 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-208ENST00000601220 FBXL17Q9UF56 701 aa13.1□□□□□ -0.31
CHMP2A-208ENST00000601220 A0A0G2JRQ6 117 aa13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 DNASE2O00115 360 aaPredicted RBP13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 CRYBB3P26998 211 aa13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 SNCAP37840 140 aa13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 ETV6P41212 452 aa13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 BSXQ3C1V8 233 aa13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 Q8NAQ8 132 aa13.09□□□□□ -0.31
CHMP2A-208ENST00000601220 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 K7EQG2 157 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 CLN5O75503 358 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 CD3DP04234 171 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 IFNA4P05014 189 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 PGAM2P15259 253 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 Q6ZRM9 215 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms