RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
USE1-208ENST00000600970 MORN3Q6PF18 240 aaPredicted RBP12.1□□□□□ -0.47
USE1-208ENST00000600970 TOMM20LQ6UXN7 152 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 CELA1Q9UNI1 258 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 AGRNO00468 2067 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 DEFB131BA0A096LNP1 70 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 GNG7O60262 68 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 PGLYRP1O75594 196 aaPredicted RBP12.09□□□□□ -0.47
USE1-208ENST00000600970 MT-CO2P00403 227 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 SPP1P10451 314 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 ZNF767PQ75MW2 155 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 TXNL4BQ9NX01 149 aaKnown RBP12.09□□□□□ -0.47
USE1-208ENST00000600970 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 RABAC1Q9UI14 185 aa12.09□□□□□ -0.47
USE1-208ENST00000600970 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
USE1-208ENST00000600970 HERV-K104P61576 105 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 C12orf74Q32Q52 190 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 LGALS9BQ3B8N2 356 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 SFXN4Q6P4A7 337 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 TPRA1Q86W33 373 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 PINX1Q96BK5 328 aaKnown RBP12.08□□□□□ -0.48
USE1-208ENST00000600970 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 CLEC5AQ9NY25 188 aa12.08□□□□□ -0.48
USE1-208ENST00000600970 HSPG2P98160 4391 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 FGF9P31371 208 aaPredicted RBP12.07□□□□□ -0.48
USE1-208ENST00000600970 UBE2UQ5VVX9 321 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 ZNF575Q86XF7 245 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 ZNF114Q8NC26 417 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 CSNK1G2-AS1Q8NCQ2 148 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 OR5H6Q8NGV6 325 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
USE1-208ENST00000600970 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
USE1-208ENST00000600970 MEIS3P1A6NDR6 274 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 K7EQG2 157 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 TSPAN14Q8NG11 270 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 GRAMD2BQ96HH9 432 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 TSC22D3Q99576 134 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 AUNIPQ9H7T9 357 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 EHFQ9NZC4 300 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 TBC1D24Q9ULP9 559 aa12.06□□□□□ -0.48
USE1-208ENST00000600970 CBX5P45973 191 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 DHRS11Q6UWP2 260 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 ZNF600Q6ZNG1 722 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 STXBP6Q8NFX7 210 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 NRG4Q8WWG1 115 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 MOB3AQ96BX8 217 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
USE1-208ENST00000600970 TMEM231Q9H6L2 316 aa12.05□□□□□ -0.48
USE1-208ENST00000600970 A0A0A6YYH2 397 aa12.04□□□□□ -0.48
USE1-208ENST00000600970 A0A1B0GU03 582 aa12.04□□□□□ -0.48
USE1-208ENST00000600970 A6NJ64 397 aa12.04□□□□□ -0.48
USE1-208ENST00000600970 ZNF688P0C7X2 276 aa12.04□□□□□ -0.48
USE1-208ENST00000600970 SCAND1P57086 179 aa12.04□□□□□ -0.48
USE1-208ENST00000600970 PRCDQ00LT1 54 aa12.04□□□□□ -0.48
USE1-208ENST00000600970 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 TMEM50AO95807 157 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 NPPCP23582 126 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 NPBWR1P48145 328 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 RFX2P48378 723 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 ACTL10Q5JWF8 245 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 Q6ZR54 194 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 PLA2G2EQ9NZK7 142 aa12.03□□□□□ -0.48
USE1-208ENST00000600970 A0A1W2PS18 150 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 GPR31O00270 319 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 IFNA10P01566 189 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 CLEC2LP0C7M8 214 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 SDC2P34741 201 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.49
USE1-208ENST00000600970 MXD1Q05195 221 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 OR4A16Q8NH70 328 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 DCANP1Q8TF63 244 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 SEC22AQ96IW7 307 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 IFT46Q9NQC8 304 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 DIABLOQ9NR28 239 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 BLOC1S6Q9UL45 172 aa12.02□□□□□ -0.49
USE1-208ENST00000600970 PMP2P02689 132 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 CD74P04233 296 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 NPY1RP25929 384 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 P2RY1P47900 373 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 HSPE1P61604 102 aaKnown RBP12.01□□□□□ -0.49
USE1-208ENST00000600970 IDNKQ5T6J7 187 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 H2BFWTQ7Z2G1 175 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 SSR3Q9UNL2 185 aa12.01□□□□□ -0.49
USE1-208ENST00000600970 IFNA21P01568 189 aa12□□□□□ -0.49
USE1-208ENST00000600970 IFNA17P01571 189 aa12□□□□□ -0.49
USE1-208ENST00000600970 IGKV1-39P01597 117 aa12□□□□□ -0.49
USE1-208ENST00000600970 IGKV1D-39P04432 117 aa12□□□□□ -0.49
USE1-208ENST00000600970 CRYBB3P26998 211 aa12□□□□□ -0.49
USE1-208ENST00000600970 PSMB9P28065 219 aa12□□□□□ -0.49
USE1-208ENST00000600970 PPP5CP53041 499 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms