RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 BTNL8Q6UX41 500 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 LHFPL4Q7Z7J7 247 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 COMMD7Q86VX2 200 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 LFNGQ8NES3 379 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 OR1L6Q8NGR2 347 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 AJUBAQ96IF1 538 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
ZNF548-211ENST00000600927 KCNIP2Q9NS61 270 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 METTL1Q9UBP6 276 aaKnown RBP9.17□□□□□ -0.94
ZNF548-211ENST00000600927 WDR83OSQ9Y284 106 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 HILPDAQ9Y5L2 63 aa9.17□□□□□ -0.94
ZNF548-211ENST00000600927 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 MFSD2BA6NFX1 497 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 CORTO00230 105 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 CA2P00918 260 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 RNASE2P10153 161 aaKnown RBP9.16□□□□□ -0.94
ZNF548-211ENST00000600927 PRB3Q04118 309 aaPredicted RBP9.16□□□□□ -0.94
ZNF548-211ENST00000600927 RAB31Q13636 194 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 AANATQ16613 207 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 AKR1C8PQ5T2L2 129 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 ZNF709Q8N972 641 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 RITA1Q96K30 269 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 DUX5Q96PT3 197 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 SMDT1Q9H4I9 107 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
ZNF548-211ENST00000600927 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 CGB1A6NKQ9 187 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 IGKV1D-33P01593 117 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 IGKV1-33P01594 117 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 HBE1P02100 147 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 SAA4P35542 130 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 IER3P46695 156 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 RAB2AP61019 212 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 PJVKQ0ZLH3 352 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 PMS2P11Q13670 270 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 MMDQ15546 238 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 C5orf64Q2M2E5 130 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 SPINK9Q5DT21 86 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 PXDC1Q5TGL8 231 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 ETFRF1Q6IPR1 90 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 ZNF562Q6V9R5 426 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 TMEM144Q7Z5S9 345 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 TMEM170AQ8WVE7 144 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 SSMEM1Q8WWF3 244 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 FAM210AQ96ND0 272 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 HINT2Q9BX68 163 aa9.15□□□□□ -0.94
ZNF548-211ENST00000600927 A0A1B0GW64 132 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 KRBOX1C9JBD0 128 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 PRH1P02810 166 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 FBP1P09467 338 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 CAMLGP49069 296 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
ZNF548-211ENST00000600927 CD69Q07108 199 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 TNXAQ16473 311 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 TEPPQ6URK8 271 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 TREML4Q6UXN2 200 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 Q6ZRG5 221 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 CXorf58Q96LI9 332 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 TMEM68Q96MH6 324 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 SH3BGRL3Q9H299 93 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 FBXL15Q9H469 300 aa9.14□□□□□ -0.95
ZNF548-211ENST00000600927 LSM4Q9Y4Z0 139 aaKnown RBP9.14□□□□□ -0.95
ZNF548-211ENST00000600927 IGLC7A0M8Q6 106 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 E7EUB6 86 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 NDUFS6O75380 124 aaKnown RBP9.13□□□□□ -0.95
ZNF548-211ENST00000600927 IGHV4-59P01825 116 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 OR13C7P0DN81 318 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 FGF7P21781 194 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 OPRK1P41145 380 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
ZNF548-211ENST00000600927 WT1-ASQ06250 92 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 HES1Q14469 280 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 PLGLAQ15195 96 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 AWAT1Q58HT5 328 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 TMEM41BQ5BJD5 291 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-211ENST00000600927 DYNAPQ8N1N2 210 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
ZNF548-211ENST00000600927 CITED4Q96RK1 184 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 NPCDR1Q9BY65 106 aa9.13□□□□□ -0.95
ZNF548-211ENST00000600927 UBE2L5PA0A1B0GUS4 154 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 ANKRD34BA5PLL1 514 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 TEX22C9J3V5 150 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 CYB5BO43169 146 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 TSPAN15O95858 294 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 HLA-DRB1P01911 266 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 MYOD1P15172 320 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 TMEM11P17152 192 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 CNTFRP26992 372 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 RUNX1Q01196 453 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 FOXL1Q12952 345 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 ACOT6Q3I5F7 207 aaPredicted RBP9.12□□□□□ -0.95
ZNF548-211ENST00000600927 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 OR10W1Q8NGF6 305 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 PCNPQ8WW12 178 aaKnown RBP9.12□□□□□ -0.95
ZNF548-211ENST00000600927 C17orf50Q8WW18 174 aa9.12□□□□□ -0.95
ZNF548-211ENST00000600927 RBMXL1Q96E39 390 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms