RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 FASNP49327 2511 aaKnown RBP12.22□□□□□ -0.45
VRK3-218ENST00000600031 CTXND1A0A1B0GTU2 59 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 MSMBP08118 114 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 MC5RP33032 325 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
VRK3-218ENST00000600031 TMEM177Q53S58 311 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 SPNS3Q6ZMD2 512 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 CYP2G1PQ6ZSU1 146 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 OR10P1Q8NGE3 313 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 OSR1Q8TAX0 266 aaPredicted RBP12.21□□□□□ -0.45
VRK3-218ENST00000600031 RITA1Q96K30 269 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 HARBI1Q96MB7 349 aa12.21□□□□□ -0.45
VRK3-218ENST00000600031 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.45
VRK3-218ENST00000600031 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
VRK3-218ENST00000600031 TRGC1P0CF51 173 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 PSMB3P49720 205 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 RELBQ01201 579 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 MAPK1IP1LQ8NDC0 245 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 PMS2P5A8MQ11 134 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 UBE2E1P51965 193 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 CD81P60033 236 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 HIST3H2BBQ8N257 126 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 OR4A16Q8NH70 328 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 SMIM7Q9BQ49 75 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 MANBALQ9NQG1 85 aa12.2□□□□□ -0.46
VRK3-218ENST00000600031 B4DSR2 109 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 KBTBD11O94819 623 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 IL6RP08887 468 aaPredicted RBP12.19□□□□□ -0.46
VRK3-218ENST00000600031 SAA1P0DJI8 122 aaPredicted RBP12.19□□□□□ -0.46
VRK3-218ENST00000600031 CEACAM3P40198 252 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
VRK3-218ENST00000600031 DNLZQ5SXM8 178 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 ACSM6Q6P461 480 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 DTD1Q8TEA8 209 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 FRZBQ92765 325 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
VRK3-218ENST00000600031 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
VRK3-218ENST00000600031 TRAV20A0A0B4J274 112 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 TIMM23O14925 209 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 FGF7P21781 194 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 AARDQ4LEZ3 155 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 DYNAPQ8N1N2 210 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 OR10G9Q8NGN4 311 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 OR10G7Q8NGN6 311 aa12.19□□□□□ -0.46
VRK3-218ENST00000600031 C17orf112F2Z3M2 114 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 LY86O95711 162 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 LGALS4P56470 323 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 LOXL1Q08397 574 aaPredicted RBP12.18□□□□□ -0.46
VRK3-218ENST00000600031 SSX2Q16385 188 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 MINOS1Q5TGZ0 78 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 ZNF709Q8N972 641 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 MINOS1-NBL1R4GNA1 71 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 TNCP24821 2201 aa12.18□□□□□ -0.46
VRK3-218ENST00000600031 CENPVL3A0A0U1RRI6 287 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 UPK2O00526 184 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 MYOD1P15172 320 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 BSXQ3C1V8 233 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 FFAR4Q5NUL3 377 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 OR10D4PQ8NGN7 298 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 CFHR4Q92496 578 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 AJUBAQ96IF1 538 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 Q96MF0 132 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 PYGO2Q9BRQ0 406 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 SRD5A3Q9H8P0 318 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 HIF1ANQ9NWT6 349 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 BET1LQ9NYM9 111 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 C15orf61A6NNL5 157 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 PHOX2AO14813 284 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 ADIRFQ15847 76 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 FAM209BQ5JX69 171 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 PRSS57Q6UWY2 283 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 TMEM14BQ9NUH8 114 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 ZMAT5Q9UDW3 170 aaKnown RBP12.17□□□□□ -0.46
VRK3-218ENST00000600031 CELSR1Q9NYQ6 3014 aa12.17□□□□□ -0.46
VRK3-218ENST00000600031 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.46
VRK3-218ENST00000600031 SOX15O60248 233 aa12.16□□□□□ -0.46
VRK3-218ENST00000600031 PFN1P07737 140 aaKnown RBP12.16□□□□□ -0.46
VRK3-218ENST00000600031 CNTFRP26992 372 aa12.16□□□□□ -0.46
VRK3-218ENST00000600031 SAA4P35542 130 aa12.16□□□□□ -0.46
VRK3-218ENST00000600031 RPL23P62829 140 aaKnown RBP12.16□□□□□ -0.46
VRK3-218ENST00000600031 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
VRK3-218ENST00000600031 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms