RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 OR52E5Q8NH55 327 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 SMIM8Q96KF7 97 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 TSNAXQ99598 290 aaKnown RBP10.64□□□□□ -0.71
IRF3-225ENST00000600022 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 HIPK2Q9H2X6 1198 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 RBKSQ9H477 322 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 PSENENQ9NZ42 101 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 U3KQ87 197 aa10.64□□□□□ -0.71
IRF3-225ENST00000600022 JTBO76095 146 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 OR2B8PP59922 312 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 HBG1P69891 147 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 HBG2P69892 147 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 IFITM2Q01629 132 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 KIAA0141Q14154 515 aaPredicted RBP10.63□□□□□ -0.71
IRF3-225ENST00000600022 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 ZNF429Q86V71 674 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 SBSPONQ8IVN8 264 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 DTD1Q8TEA8 209 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 RITA1Q96K30 269 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 RNF5Q99942 180 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 BET1LQ9NYM9 111 aa10.63□□□□□ -0.71
IRF3-225ENST00000600022 MSGN1A6NI15 193 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 SPDEFO95238 335 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 OR9G9P0C7N8 305 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 IAPPP10997 89 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 HOXA1P49639 335 aaPredicted RBP10.62□□□□□ -0.71
IRF3-225ENST00000600022 EWSR1Q01844 656 aaKnown RBP eCLIP10.62□□□□□ -0.71
IRF3-225ENST00000600022 FOXE3Q13461 319 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 ZNF266Q14584 549 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 NDUFA5Q16718 116 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 OR11H1Q8NG94 326 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 OR2T10Q8NGZ9 312 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 ST8SIA2Q92186 375 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 PHYHIPLQ96FC7 376 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 OR5B12Q96R08 314 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
IRF3-225ENST00000600022 COMMD5Q9GZQ3 224 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
IRF3-225ENST00000600022 FOXA2Q9Y261 457 aaPredicted RBP10.62□□□□□ -0.71
IRF3-225ENST00000600022 STRAPQ9Y3F4 350 aaKnown RBP10.62□□□□□ -0.71
IRF3-225ENST00000600022 CSMD3Q7Z407 3707 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 FAM24AA6NFZ4 105 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 G3V318 75 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 C3orf84H3BNL1 204 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 UPK2O00526 184 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 DFFBO76075 338 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 ACTL6BO94805 426 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 KBTBD11O94819 623 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 IGHG4P01861 327 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 PSMB8P28062 276 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 CD1BP29016 333 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 SULT1A1P50225 295 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 HSPE1P61604 102 aaKnown RBP10.61□□□□□ -0.71
IRF3-225ENST00000600022 FHL3Q13643 280 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 SPANXN5Q5MJ07 72 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 CASC10Q5T4H9 136 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 TMEM252Q8N6L7 170 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 STOML3Q8TAV4 291 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 HEYLQ9NQ87 328 aaPredicted RBP10.61□□□□□ -0.71
IRF3-225ENST00000600022 FBXL17Q9UF56 701 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 ZNF256Q9Y2P7 627 aaPredicted RBP10.61□□□□□ -0.71
IRF3-225ENST00000600022 ZNF257Q9Y2Q1 563 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 OR51B2Q9Y5P1 312 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 DNAH1Q9P2D7 4330 aa10.61□□□□□ -0.71
IRF3-225ENST00000600022 MOSP00540 346 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 ELANEP08246 267 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 SAA1P0DJI8 122 aaPredicted RBP10.6□□□□□ -0.71
IRF3-225ENST00000600022 CNTFRP26992 372 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 GNB1P62873 340 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 RPL8P62917 257 aaKnown RBP10.6□□□□□ -0.71
IRF3-225ENST00000600022 EXOSC2Q13868 293 aaKnown RBP10.6□□□□□ -0.71
IRF3-225ENST00000600022 SLC25A24Q6NUK1 477 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 BAP18Q8IXM2 172 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 TEX45Q8NA69 505 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 OR5B3Q8NH48 314 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 SCARB1Q8WTV0 552 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 RASL11BQ9BPW5 248 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 SMIM3Q9BZL3 60 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 C11orf1Q9H5F2 150 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 PLEKHA3Q9HB20 300 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 TMEM14BQ9NUH8 114 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 KIAA1456Q9P272 454 aa10.6□□□□□ -0.71
IRF3-225ENST00000600022 ZMAT5Q9UDW3 170 aaKnown RBP10.6□□□□□ -0.71
IRF3-225ENST00000600022 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 H3BP45 60 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 IFNA5P01569 189 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 IGLV2-23P01705 113 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
IRF3-225ENST00000600022 RAB11AP62491 216 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 PLGLAQ15195 96 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 MMD2Q8IY49 270 aa10.59□□□□□ -0.71
IRF3-225ENST00000600022 PUSL1Q8N0Z8 303 aaKnown RBP10.59□□□□□ -0.71
IRF3-225ENST00000600022 LILRB2Q8N423 598 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms