RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 RCVRNP35243 200 aa12.92□□□□□ -0.34
HOMER3-210ENST00000599097 RPS19P39019 145 aaKnown RBP12.92□□□□□ -0.34
HOMER3-210ENST00000599097 MFAP2P55001 183 aa12.92□□□□□ -0.34
HOMER3-210ENST00000599097 PRCDQ00LT1 54 aa12.92□□□□□ -0.34
HOMER3-210ENST00000599097 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
HOMER3-210ENST00000599097 CORTO00230 105 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 CHEK1O14757 476 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
HOMER3-210ENST00000599097 DFFBO76075 338 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 ZNF182P17025 639 aaPredicted RBP12.91□□□□□ -0.34
HOMER3-210ENST00000599097 HLA-DMAP28067 261 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 SNCAP37840 140 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 UCP3P55916 312 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 PHLDA2Q53GA4 152 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 RNF2Q99496 336 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 PDCD10Q9BUL8 212 aa12.91□□□□□ -0.34
HOMER3-210ENST00000599097 NXF2Q9GZY0 626 aaKnown RBP12.91□□□□□ -0.34
HOMER3-210ENST00000599097 BIRC6Q9NR09 4857 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 APOA1P02647 267 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 IFNA4P05014 189 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 TGFBR1P36897 503 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 SUB1P53999 127 aaKnown RBP eCLIP12.9□□□□□ -0.34
HOMER3-210ENST00000599097 HSPE1P61604 102 aaKnown RBP12.9□□□□□ -0.34
HOMER3-210ENST00000599097 MZT2AQ6P582 158 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 TBC1D26Q86UD7 250 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 ZNF486Q96H40 463 aaPredicted RBP12.9□□□□□ -0.34
HOMER3-210ENST00000599097 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 RARRES2Q99969 163 aa12.9□□□□□ -0.34
HOMER3-210ENST00000599097 C11orf68Q9H3H3 251 aaKnown RBP12.9□□□□□ -0.34
HOMER3-210ENST00000599097 EPPK1P58107 5090 aaKnown RBP12.9□□□□□ -0.34
HOMER3-210ENST00000599097 IGHV3OR16-8A0A075B7F1 116 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 TRAV2A0A0B4J234 112 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 I3L2K1 104 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 DNASE2O00115 360 aaPredicted RBP12.89□□□□□ -0.35
HOMER3-210ENST00000599097 MT-CO2P00403 227 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 TCTAP57738 103 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 SPCS2Q15005 226 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 TMEM41BQ5BJD5 291 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 DYNC2LI1Q8TCX1 351 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 GPX8Q8TED1 209 aa12.89□□□□□ -0.35
HOMER3-210ENST00000599097 PHLDA1Q8WV24 401 aaPredicted RBP12.89□□□□□ -0.35
HOMER3-210ENST00000599097 NARS2Q96I59 477 aaKnown RBP12.89□□□□□ -0.35
HOMER3-210ENST00000599097 ALMS1Q8TCU4 4167 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 A0A1W2PS18 150 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 A6NHS1 94 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 ZNF600Q6ZNG1 722 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 APRG1Q8IVJ8 170 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 CENPSQ8N2Z9 138 aa12.88□□□□□ -0.35
HOMER3-210ENST00000599097 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
HOMER3-210ENST00000599097 ST8SIA3O43173 380 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 TBPP20226 339 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 TFPI2P48307 235 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 AKR1C2P52895 323 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 RBMS2Q15434 407 aaKnown RBP12.87□□□□□ -0.35
HOMER3-210ENST00000599097 TCF24Q7RTU0 167 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 LYSMD2Q8IV50 215 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 C11orf45Q8TAV5 145 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 C15orf40Q8WUR7 153 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 MRGPRFQ96AM1 343 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 ENY2Q9NPA8 101 aa12.87□□□□□ -0.35
HOMER3-210ENST00000599097 INS-IGF2F8WCM5 200 aa12.86□□□□□ -0.35
HOMER3-210ENST00000599097 B3GALNT1O75752 331 aa12.86□□□□□ -0.35
HOMER3-210ENST00000599097 EIF2B2P49770 351 aaKnown RBP12.86□□□□□ -0.35
HOMER3-210ENST00000599097 RND3P61587 244 aa12.86□□□□□ -0.35
HOMER3-210ENST00000599097 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
HOMER3-210ENST00000599097 ARRDC1Q8N5I2 433 aa12.86□□□□□ -0.35
HOMER3-210ENST00000599097 COMMD3Q9UBI1 195 aa12.86□□□□□ -0.35
HOMER3-210ENST00000599097 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
HOMER3-210ENST00000599097 IFNA17P01571 189 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 PGAM2P15259 253 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
HOMER3-210ENST00000599097 TMEM187Q14656 261 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 RNASE10Q5GAN6 216 aaKnown RBP12.85□□□□□ -0.35
HOMER3-210ENST00000599097 SNX29P2Q8IUI4 249 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 CCDC71LQ8N9Z2 235 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 OR11H2Q8NH07 326 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
HOMER3-210ENST00000599097 DBX1A6NMT0 343 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 NPPCP23582 126 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
HOMER3-210ENST00000599097 FAM90A2PQ658T7 463 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 STHQ8IWL8 128 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
HOMER3-210ENST00000599097 GRAMD2BQ96HH9 432 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 METTL26Q96S19 204 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
HOMER3-210ENST00000599097 RABL2AQ9UBK7 228 aaPredicted RBP12.84□□□□□ -0.35
HOMER3-210ENST00000599097 RABL2BQ9UNT1 228 aa12.84□□□□□ -0.35
HOMER3-210ENST00000599097 IGHV3-49A0A0A0MS15 119 aa12.83□□□□□ -0.36
HOMER3-210ENST00000599097 C11orf94C9JXX5 98 aa12.83□□□□□ -0.36
HOMER3-210ENST00000599097 MCFD2Q8NI22 146 aa12.83□□□□□ -0.36
HOMER3-210ENST00000599097 RNASE11Q8TAA1 199 aaKnown RBP12.83□□□□□ -0.36
HOMER3-210ENST00000599097 ZFAND1Q8TCF1 268 aa12.83□□□□□ -0.36
HOMER3-210ENST00000599097 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms