RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 FBXO7Q9Y3I1 522 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 TEX22C9J3V5 150 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 IGF1P05019 195 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 CDX1P47902 265 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 PRCDQ00LT1 54 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
SHKBP1-218ENST00000598907 RBMXL2O75526 392 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 ACTL6BO94805 426 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 CNIH1O95406 144 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 MBPP02686 304 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 GIPP09681 153 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 GNB1P62873 340 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 C19orf54Q5BKX5 351 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 ASPHD1Q5U4P2 390 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 OR5B12Q96R08 314 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 SRSF8Q9BRL6 282 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 PDCD10Q9BUL8 212 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 RBKSQ9H477 322 aa10.65□□□□□ -0.7
SHKBP1-218ENST00000598907 IGLC7A0M8Q6 106 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 MSGN1A6NI15 193 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 IFNA17P01571 189 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 RAB32Q13637 225 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 HAGHQ16775 308 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 C11orf1Q9H5F2 150 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 KMT2AQ03164 3969 aa10.64□□□□□ -0.71
SHKBP1-218ENST00000598907 A0A1W2PN81 502 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 K7EPK0 472 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 OVOL1O14753 267 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 SYNGR2O43760 224 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 MED6O75586 246 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 NXPH3O95157 252 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 OR8U8P0C7N1 319 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 CHRNA7P36544 502 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 RAP2BP61225 183 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 FOXE3Q13461 319 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 AKIRIN2Q53H80 203 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 HSD17B13Q7Z5P4 300 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 OR10W1Q8NGF6 305 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 OR1N2Q8NGR9 330 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 GRPEL2Q8TAA5 225 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 PPP1R1CQ8WVI7 109 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 DCUN1D4Q92564 292 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 ST6GAL2Q96JF0 529 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 PARP11Q9NR21 331 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 RCL1Q9Y2P8 373 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-218ENST00000598907 G3V3Q6 166 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 AP4M1O00189 453 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 TMEM50AO95807 157 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 CRYGCP07315 174 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 PSMB6P28072 239 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 PAX9P55771 341 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 ZNF616Q08AN1 781 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 BSXQ3C1V8 233 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 TTC9CQ8N5M4 171 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 OR2C3Q8N628 320 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 LFNGQ8NES3 379 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 DTD1Q8TEA8 209 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 RNF126Q9BV68 326 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 PLEKHA3Q9HB20 300 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
SHKBP1-218ENST00000598907 TRAV14DV4A0A0A6YYC5 116 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 NPIPB5A8MRT5 1133 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 CEBPZOSA8MTT3 80 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 H0YIZ8 118 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 DEDDO75618 318 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 MPC2O95563 127 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 SCGB1D2O95969 90 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 AREGP15514 252 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 CTRB1P17538 263 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 PPIFP30405 207 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 TAS2R30P59541 319 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 CFHR3Q02985 330 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 TMEM267Q0VDI3 215 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 Q5BKY6 102 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 PVRIGQ6DKI7 326 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 CTRB2Q6GPI1 263 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 Q8N1Y9 231 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 RAB40CQ96S21 281 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 HINT2Q9BX68 163 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 GNB4Q9HAV0 340 aa10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 RANGRFQ9HD47 186 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-218ENST00000598907 TRAV41A0A0B4J266 112 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 G3V318 75 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms