RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, human

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER3-208	ENST00000595756	C4orf46	Q504U0	113 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756	CTRB2	Q6GPI1	263 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756	OR1L6	Q8NGR2	347 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756	COQ8A	Q8NI60	647 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756	ENKUR	Q8TC29	256 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756	HINT2	Q9BX68	163 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756	THYN1	Q9P016	225 aa		13.58	□□□□□ -0.24
HOMER3-208	ENST00000595756		A0A0B4J293	547 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756		A0A1B0GW64	132 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	IGLC7	A0M8Q6	106 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	C9orf170	A2RU37	121 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	IFNA17	P01571	189 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	AREG	P15514	252 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	MECP2	P51608	486 aa	Known RBP	13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	KLK9	Q2XQG4	91 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	LYG2	Q86SG7	212 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	OR52E5	Q8NH55	327 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	GPR146	Q96CH1	333 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	EDA2R	Q9HAV5	297 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	PALMD	Q9NP74	551 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	KLK9	Q9UKQ9	250 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	TMED3	Q9Y3Q3	217 aa		13.57	□□□□□ -0.24
HOMER3-208	ENST00000595756	IZUMO1R	A6ND01	250 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	DBX1	A6NMT0	343 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	OR2J3	O76001	311 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	SULT1A3	P0DMM9	295 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	SULT1A4	P0DMN0	295 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	OR13C7	P0DN81	318 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	ERH	P84090	104 aa	Known RBP	13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	IFITM3	Q01628	133 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	AARD	Q4LEZ3	155 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	LYZL2	Q7Z4W2	148 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	PLEKHA3	Q9HB20	300 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	ENY2	Q9NPA8	101 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756	NUDT15	Q9NV35	164 aa		13.56	□□□□□ -0.24
HOMER3-208	ENST00000595756		A0A0G2JRQ6	117 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756		A0A1B0GU03	582 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	INS-IGF2	F8WCM5	200 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	ST8SIA3	O43173	380 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	H2AFB2	P0C5Z0	115 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	SLC25A6	P12236	298 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	ANXA7	P20073	488 aa	Known RBP	13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	SPCS3	P61009	180 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	DHRS2	Q13268	280 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	SMCO1	Q147U7	214 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	HAGH	Q16775	308 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	IZUMO4	Q1ZYL8	232 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	ANKRD55	Q3KP44	614 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	NMS	Q5H8A3	153 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	DUSP18	Q8NEJ0	188 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	OR10W1	Q8NGF6	305 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	CACNG5	Q9UF02	275 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	DMRT1	Q9Y5R6	373 aa		13.55	□□□□□ -0.24
HOMER3-208	ENST00000595756	TENM2	Q9NT68	2774 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	TRAV6	A0A075B6T7	132 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	WT1-AS	Q06250	92 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	ADAMTSL5	Q6ZMM2	481 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756		Q6ZRM9	215 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	OR2C3	Q8N628	320 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	TUBA4B	Q9H853	241 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	PRR13	Q9NZ81	148 aa		13.54	□□□□□ -0.24
HOMER3-208	ENST00000595756	PPP5D1	E7EU14	171 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	LGALS9	O00182	355 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	GGCT	O75223	188 aa	Known RBP	13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	IFNA21	P01568	189 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	REG1A	P05451	166 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	SUB1	P53999	127 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	CD81	P60033	236 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	CD300E	Q496F6	205 aa	Predicted RBP	13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	C19orf35	Q6ZS72	473 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	DYNLRB2	Q8TF09	96 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	CXorf58	Q96LI9	332 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	FANCD2OS	Q96PS1	177 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	ZC4H2	Q9NQZ6	224 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	FBXL7	Q9UJT9	491 aa		13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	F11R	Q9Y624	299 aa	Known RBP	13.53	□□□□□ -0.24
HOMER3-208	ENST00000595756	IGLV11-55	A0A075B6I3	123 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	C2orf70	A6NJV1	201 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	SNCA	P37840	140 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	HOXA1	P49639	335 aa	Predicted RBP	13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	PLET1	Q6UQ28	207 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	ZNF114	Q8NC26	417 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	OR1P1	Q8NH06	330 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	MITD1	Q8WV92	249 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	CCDC140	Q96MF4	163 aa		13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	TECR	Q9NZ01	308 aa	Known RBP	13.52	□□□□□ -0.25
HOMER3-208	ENST00000595756	HOXB5	P09067	269 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	ARL3	P36405	182 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	SLC25A24	Q6NUK1	477 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	NRARP	Q7Z6K4	114 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	GPHB5	Q86YW7	130 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	OR1S1	Q8NH92	325 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	EEF1AKMT3	Q96AZ1	226 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	NEURL2	Q9BR09	285 aa		13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	GPN1	Q9HCN4	374 aa	Predicted RBP	13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	PLEC	Q15149	4684 aa	Known RBP	13.51	□□□□□ -0.25
HOMER3-208	ENST00000595756	TRBV7-1	A0A0A6YYK4	115 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	CEBPZOS	A8MTT3	80 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756		A8MWP6	167 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms