RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
ZNF550-207ENST00000595560 IGHV3-35A0A0C4DH35 117 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 ZNF785A8K8V0 405 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 I3L2K1 104 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 IFNA17P01571 189 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 ADMP35318 185 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 ETV6P41212 452 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 Q56UQ5 140 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 SELENOHQ8IZQ5 122 aaKnown RBP11.91□□□□□ -0.5
ZNF550-207ENST00000595560 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 UXS1Q8NBZ7 420 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 DEDD2Q8WXF8 326 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 TMEM230Q96A57 120 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 WWC2-AS2Q96NR7 200 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 TXN2Q99757 166 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 CHRDL1Q9BU40 450 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 MLXQ9UH92 298 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 TMEM56-RWDD3S4R434 201 aa11.91□□□□□ -0.5
ZNF550-207ENST00000595560 NDUFA4O00483 81 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 MT-CO2P00403 227 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 SNCAP37840 140 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 SPANXN2Q5MJ10 180 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 TMEM268Q5VZI3 342 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 ZNF57Q68EA5 555 aaPredicted RBP11.9□□□□□ -0.5
ZNF550-207ENST00000595560 PVRIGQ6DKI7 326 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 Q6ZRM9 215 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 DAZ1Q9NQZ3 744 aaKnown RBP11.9□□□□□ -0.5
ZNF550-207ENST00000595560 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.5
ZNF550-207ENST00000595560 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.5
ZNF550-207ENST00000595560 CTSGP08311 255 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 HOXA1P49639 335 aaPredicted RBP11.89□□□□□ -0.51
ZNF550-207ENST00000595560 MFAP4P55083 255 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 CD81P60033 236 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 SPCS3P61009 180 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 TMEM187Q14656 261 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 BTNL8Q6UX41 500 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 TMEM61Q8N0U2 210 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
ZNF550-207ENST00000595560 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.89□□□□□ -0.51
ZNF550-207ENST00000595560 CACNG5Q9UF02 275 aa11.89□□□□□ -0.51
ZNF550-207ENST00000595560 CORTO00230 105 aa11.88□□□□□ -0.51
ZNF550-207ENST00000595560 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
ZNF550-207ENST00000595560 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
ZNF550-207ENST00000595560 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
ZNF550-207ENST00000595560 SUPT4H1P63272 117 aaKnown RBP11.88□□□□□ -0.51
ZNF550-207ENST00000595560 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
ZNF550-207ENST00000595560 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
ZNF550-207ENST00000595560 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
ZNF550-207ENST00000595560 NEURL2Q9BR09 285 aa11.88□□□□□ -0.51
ZNF550-207ENST00000595560 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 CD7P09564 240 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 AKR1C4P17516 323 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 SRPXP78539 464 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 BSXQ3C1V8 233 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 GPR146Q96CH1 333 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 TM2D3Q9BRN9 247 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 SRRQ9GZT4 340 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 CACFD1Q9UGQ2 172 aa11.87□□□□□ -0.51
ZNF550-207ENST00000595560 A0A0B4J2A0 478 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 C15orf62A8K5M9 175 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 K7EMT4 169 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 GNG7O60262 68 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 ANXA3P12429 323 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 RCHY1Q96PM5 261 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
ZNF550-207ENST00000595560 C20orf24Q9BUV8 137 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 PRR13Q9NZ81 148 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 SHPKQ9UHJ6 478 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
ZNF550-207ENST00000595560 PIGBOS1A0A0B4J2F0 54 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 SCAF4O95104 1147 aaKnown RBP11.85□□□□□ -0.51
ZNF550-207ENST00000595560 SULT1A3P0DMM9 295 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 SULT1A4P0DMN0 295 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 NPBWR1P48145 328 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 TMEM128Q5BJH2 165 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 SLC16A13Q7RTY0 426 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 DUSP18Q8NEJ0 188 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 OR10C1Q96KK4 312 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 NDUFA13Q9P0J0 144 aa11.85□□□□□ -0.51
ZNF550-207ENST00000595560 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
ZNF550-207ENST00000595560 HTR2BP41595 481 aa11.84□□□□□ -0.51
ZNF550-207ENST00000595560 HAGHQ16775 308 aa11.84□□□□□ -0.51
ZNF550-207ENST00000595560 ANKRD55Q3KP44 614 aa11.84□□□□□ -0.51
ZNF550-207ENST00000595560 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
ZNF550-207ENST00000595560 TMED4Q7Z7H5 227 aa11.84□□□□□ -0.51
ZNF550-207ENST00000595560 LGI3Q8N145 548 aa11.84□□□□□ -0.51
ZNF550-207ENST00000595560 HUWE1Q7Z6Z7 4374 aaKnown RBP11.83□□□□□ -0.52
ZNF550-207ENST00000595560 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
ZNF550-207ENST00000595560 TSPAN4O14817 238 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms