RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 DEFB114Q30KQ6 69 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 CD300EQ496F6 205 aaPredicted RBP8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 NMSQ5H8A3 153 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 ZNF57Q68EA5 555 aaPredicted RBP8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 PLET1Q6UQ28 207 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 IL22RA2Q969J5 263 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 MISP3Q96FF7 219 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 BSCL2Q96G97 398 aaPredicted RBP8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 ATP6V0BQ99437 205 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 MLXQ9UH92 298 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 SMAD5-AS1Q9Y6J3 95 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 DNAH7Q8WXX0 4024 aa8.3□□□□□ -1.08
SHKBP1-206ENST00000595523 ZNF320A2RRD8 509 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 ZNF785A8K8V0 405 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 CTSGP08311 255 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 FCGR2BP31994 310 aaPredicted RBP8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 BTCP35070 178 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 HOXA1P49639 335 aaPredicted RBP8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 CCR6P51684 374 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 SPCS3P61009 180 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 FAM106AQ4KMX7 169 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 LCN12Q6JVE5 192 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 TMED4Q7Z7H5 227 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 UBAC2Q8NBM4 344 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 OR2K2Q8NGT1 345 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 OR52E5Q8NH55 327 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 SLC25A21Q9BQT8 299 aaPredicted RBP8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 PDCD10Q9BUL8 212 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 KCNIP3Q9Y2W7 256 aa8.29□□□□□ -1.08
SHKBP1-206ENST00000595523 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 NXPH3O95157 252 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 FRMD6-AS1P0C7T7 363 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 C8orf88P0DMB2 117 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 IL7P13232 177 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 SNCAP37840 140 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 PPP1R1AQ13522 171 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 ANKRD55Q3KP44 614 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 Q56UQ5 140 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM128Q5BJH2 165 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 SPSB3Q6PJ21 355 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 UXS1Q8NBZ7 420 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 TMEM170AQ8WVE7 144 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 PINX1Q96BK5 328 aaKnown RBP8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 WDR89Q96FK6 387 aaPredicted RBP8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 ASCL2Q99929 193 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 FNDC4Q9H6D8 234 aaPredicted RBP8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 MRPL36Q9P0J6 103 aaKnown RBP8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
SHKBP1-206ENST00000595523 IGHV3OR16-8A0A075B7F1 116 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 A6NHS1 94 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 NDUFA4O00483 81 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 NDUFB6O95139 128 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 IGHV4-30-4P0DP06 118 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 MFAP4P55083 255 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 ELLP55199 621 aaPredicted RBP8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 RBMS2Q15434 407 aaKnown RBP8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 TRIQKQ629K1 86 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 BTNL8Q6UX41 500 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 SBSPONQ8IVN8 264 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 TMEM61Q8N0U2 210 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 LGI3Q8N145 548 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 LRTM2Q8N967 370 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 TXN2Q99757 166 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 C19orf73Q9NVV2 129 aa8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 TECRQ9NZ01 308 aaKnown RBP8.27□□□□□ -1.09
SHKBP1-206ENST00000595523 LINC00854A0A1B0GVQ3 168 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 NAP1L6A6NFF2 107 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 A8MZ25 164 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 PLA2G10O15496 165 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 SFT2D2O95562 160 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 ANXA3P12429 323 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 VAMP1P23763 118 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 SRPXP78539 464 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 TNFRSF9Q07011 255 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 SMCO1Q147U7 214 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 MLANAQ16655 118 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 CENPSQ8N2Z9 138 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 MARC2Q969Z3 335 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 PALMDQ9NP74 551 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 ENY2Q9NPA8 101 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 DAZ1Q9NQZ3 744 aaKnown RBP8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 HSPB7Q9UBY9 170 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 FLVCR2Q9UPI3 526 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 UFC1Q9Y3C8 167 aa8.26□□□□□ -1.09
SHKBP1-206ENST00000595523 CEBPZOSA8MTT3 80 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 CORTO00230 105 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 NUPL2O15504 423 aaKnown RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 ZNF207O43670 478 aaKnown RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 GNG7O60262 68 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 PITX3O75364 302 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms