RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 A6NNC1 897 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 CT45A6P0DMU7 189 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 CT45A5P0DMU8 189 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 CT45A7P0DMV0 189 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 MYOD1P15172 320 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 USF1P22415 310 aaPredicted RBP10.79□□□□□ -0.68
VRK3-209ENST00000594948 SELENOVP59797 346 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 KLF5Q13887 457 aaPredicted RBP10.79□□□□□ -0.68
VRK3-209ENST00000594948 OR1L4Q8NGR5 311 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 ITLN1Q8WWA0 313 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 GRAMD2BQ96HH9 432 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 RNF7Q9UBF6 113 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 RPUSD1Q9UJJ7 312 aaKnown RBP10.79□□□□□ -0.68
VRK3-209ENST00000594948 TRAV17A0A0B4J275 112 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 DPRXA6NFQ7 191 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
VRK3-209ENST00000594948 MGST1P10620 155 aaKnown RBP10.78□□□□□ -0.68
VRK3-209ENST00000594948 PMCHP20382 165 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 DHRS13Q6UX07 377 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 SMIM12Q96EX1 92 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 SLC25A2Q9BXI2 301 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 DNAJC4Q9NNZ3 241 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 GCM1Q9NP62 436 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 CFAP54Q96N23 3096 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 PRR14LQ5THK1 2151 aa10.78□□□□□ -0.68
VRK3-209ENST00000594948 OR2J3O76001 311 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 NPSP0C0P6 89 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 SFTPCP11686 197 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.68
VRK3-209ENST00000594948 KIAA1644Q3SXP7 199 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 SPRNQ5BIV9 151 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 TIMM23BQ5SRD1 257 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 MRPL54Q6P161 138 aaKnown RBP10.77□□□□□ -0.68
VRK3-209ENST00000594948 ZNF788Q6ZQV5 615 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 ZNF833PQ6ZTB9 187 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 OR4A5Q8NH83 315 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 OR9G1Q8NH87 305 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 C18orf32Q8TCD1 76 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 NDUFA4L2Q9NRX3 87 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 DCAF16Q9NXF7 216 aa10.77□□□□□ -0.68
VRK3-209ENST00000594948 INTS1Q8N201 2190 aaKnown RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 A0A1W2PN81 502 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 MBD3L4A6NDZ8 208 aaPredicted RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 MBD3L3A6NE82 208 aaPredicted RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 MBD3L5A6NJ08 208 aaPredicted RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 SPINK4O60575 86 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 HYPMO75409 117 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 SAA1P0DJI8 122 aaPredicted RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 TCL1AP56279 114 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 ERHP84090 104 aaKnown RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 FAM162BQ5T6X4 162 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 ATP5L2Q7Z4Y8 100 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 MOB3BQ86TA1 216 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 MBD3L2Q8NHZ7 208 aaPredicted RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 FAM122AQ96E09 287 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.69
VRK3-209ENST00000594948 SERTAD4Q9NUC0 356 aa10.77□□□□□ -0.69
VRK3-209ENST00000594948 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
VRK3-209ENST00000594948 SPRY3O43610 288 aa10.76□□□□□ -0.69
VRK3-209ENST00000594948 APOA2P02652 100 aa10.76□□□□□ -0.69
VRK3-209ENST00000594948 GATA2P23769 480 aaPredicted RBP10.76□□□□□ -0.69
VRK3-209ENST00000594948 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
VRK3-209ENST00000594948 TMEM177Q53S58 311 aa10.76□□□□□ -0.69
VRK3-209ENST00000594948 THAP8Q8NA92 274 aa10.76□□□□□ -0.69
VRK3-209ENST00000594948 SAP30LQ9HAJ7 183 aa10.76□□□□□ -0.69
VRK3-209ENST00000594948 MRPS16Q9Y3D3 137 aaKnown RBP10.76□□□□□ -0.69
VRK3-209ENST00000594948 AMMECR1Q9Y4X0 333 aaPredicted RBP10.76□□□□□ -0.69
VRK3-209ENST00000594948 DYSFO75923 2080 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 PCNX2A6NKB5 2137 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 PEX7O00628 323 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 COL8A2P25067 703 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 CHRNB4P30926 498 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 GNG10P50151 68 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 BPIFB3P59826 476 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 TBR1Q16650 682 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 TEX36Q5VZQ5 186 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 ZNF329Q86UD4 541 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 FDCSPQ8NFU4 85 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 ZNF430Q9H8G1 570 aaPredicted RBP10.75□□□□□ -0.69
VRK3-209ENST00000594948 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 CBY1Q9Y3M2 126 aa10.75□□□□□ -0.69
VRK3-209ENST00000594948 hADV38S2A0JD32 116 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 M0R1B8 84 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 COX7A2P2O60397 106 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 IGKV1-16P04430 117 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 SP9P0CG40 484 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 HIST1H1EP10412 219 aaKnown RBP10.74□□□□□ -0.69
VRK3-209ENST00000594948 SLC35B1P78383 322 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 SLAQ13239 276 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 BATFQ16520 125 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 TMEM167AQ8TBQ9 72 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 TXN2Q99757 166 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms