RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 SYNGR1O43759 233 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 IGHV3-13P01766 116 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 IGHV3-7P01780 117 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 WDR82Q6UXN9 313 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 Q8IYB0 196 aa10.31□□□□□ -0.76
LIG1-207ENST00000594759 SPACA9Q96E40 222 aaPredicted RBP10.31□□□□□ -0.76
LIG1-207ENST00000594759 CCL11P51671 97 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 SLAQ13239 276 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 TMEM177Q53S58 311 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 OR9G4Q8NGQ1 327 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 IGKV3-11P04433 115 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 CTRLP40313 264 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.3□□□□□ -0.76
LIG1-207ENST00000594759 CENPVQ7Z7K6 275 aaPredicted RBP10.3□□□□□ -0.76
LIG1-207ENST00000594759 OR1L4Q8NGR5 311 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 FLYWCH2Q96CP2 140 aaKnown RBP10.3□□□□□ -0.76
LIG1-207ENST00000594759 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 OR2H1Q9GZK4 316 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 BOKQ9UMX3 212 aaPredicted RBP10.3□□□□□ -0.76
LIG1-207ENST00000594759 LY96Q9Y6Y9 160 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 DOCK7Q96N67 2140 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 C8orf88P0DMB2 117 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 ZNF645Q8N7E2 425 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 CHRNA10Q9GZZ6 450 aa10.3□□□□□ -0.76
LIG1-207ENST00000594759 COL6A6A6NMZ7 2263 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 SAA2-SAA4A0A096LPE2 208 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 NPPCP23582 126 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 SUB1P53999 127 aaKnown RBP eCLIP10.29□□□□□ -0.761e-16■■■■■ 45.6
LIG1-207ENST00000594759 TMEM249Q2WGJ8 235 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 SLC35E4Q6ICL7 350 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 MIR17HGQ75NE6 70 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 ZNF479Q96JC4 524 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 CITED1Q99966 193 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 HTTP42858 3142 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 A0A1B0GW15 77 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 WNT2P09544 360 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIG1-207ENST00000594759 RAB1CQ92928 201 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
LIG1-207ENST00000594759 SS18L2Q9UHA2 77 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 ORM2P19652 201 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 SRD5A2P31213 254 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 WIPI1Q5MNZ9 446 aaPredicted RBP10.29□□□□□ -0.76
LIG1-207ENST00000594759 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 LINC00596Q86U02 117 aa10.29□□□□□ -0.76
LIG1-207ENST00000594759 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
LIG1-207ENST00000594759 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 IGHV5-10-1A0A0J9YXX1 117 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 PSMB11A5LHX3 300 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
LIG1-207ENST00000594759 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 ABCA1O95477 2261 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 IGKV1-27A0A075B6S5 117 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 SNCGO76070 127 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 IGFBP2P18065 325 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 EFNB3Q15768 340 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 BPTFQ12830 3046 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 A0A1W2PR77 199 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 E9PLN8 166 aa10.28□□□□□ -0.76
LIG1-207ENST00000594759 APOBEC3AP31941 199 aaPredicted RBP10.27□□□□□ -0.76
LIG1-207ENST00000594759 DEFB127Q9H1M4 99 aa10.27□□□□□ -0.76
LIG1-207ENST00000594759 HES4Q9HCC6 221 aa10.27□□□□□ -0.76
LIG1-207ENST00000594759 V9GYV3 84 aa10.27□□□□□ -0.76
LIG1-207ENST00000594759 AKAP6Q13023 2319 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 CELA2AP08217 269 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 RASL11AQ6T310 242 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 FAM169BQ8N8A8 192 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 MPC1Q9Y5U8 109 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 PGPA6NDG6 321 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 OOEPA6NGQ2 149 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 C10orf113Q5VZT2 155 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 NPFFR1Q9GZQ6 430 aa10.27□□□□□ -0.77
LIG1-207ENST00000594759 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 OR2J3O76001 311 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 ZNF138P52744 262 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 CXorf67Q86X51 503 aaPredicted RBP10.26□□□□□ -0.77
LIG1-207ENST00000594759 SPACA3Q8IXA5 215 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 TTC9CQ8N5M4 171 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 IL4P05112 153 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 ZNF716A6NP11 495 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 AHRRA9YTQ3 701 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 COX8AP10176 69 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 CACNG7P62955 275 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 Q1RN00 199 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 H0YJW9 148 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 J3QT63 122 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 FRMD6-AS1P0C7T7 363 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
LIG1-207ENST00000594759 RABAC1Q9UI14 185 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 TP53TG3Q9ULZ0 132 aa10.26□□□□□ -0.77
LIG1-207ENST00000594759 TREML4Q6UXN2 200 aa10.25□□□□□ -0.77
LIG1-207ENST00000594759 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
LIG1-207ENST00000594759 A0A1W2PQM1 296 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms