RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 YIPF6Q96EC8 236 aa7.78□□□□□ -1.16
USE1-203ENST00000593597 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
USE1-203ENST00000593597 C11orf68Q9H3H3 251 aaKnown RBP7.78□□□□□ -1.16
USE1-203ENST00000593597 VSIRQ9H7M9 311 aa7.78□□□□□ -1.16
USE1-203ENST00000593597 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
USE1-203ENST00000593597 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 A0A1B0GU03 582 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 MPTX1A8MV57 137 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 CYB5BO43169 146 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 SNAPC5O75971 98 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 IGKV1-5P01602 117 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 MFAP4P55083 255 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 LSM3P62310 102 aaKnown RBP7.77□□□□□ -1.17
USE1-203ENST00000593597 TMEM69Q5SWH9 247 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 LEMD1Q68G75 181 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 PVRIGQ6DKI7 326 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 TOMM20LQ6UXN7 152 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 TCF24Q7RTU0 167 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 OR11H2Q8NH07 326 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 GATAD1Q8WUU5 269 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 BORCS5Q969J3 196 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 RARRES2Q99969 163 aa7.77□□□□□ -1.17
USE1-203ENST00000593597 TMEM127O75204 238 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 DFFBO76075 338 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 YIF1AO95070 293 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 TAS2R46P59540 309 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 RELQ04864 619 aaPredicted RBP7.76□□□□□ -1.17
USE1-203ENST00000593597 KCTD21Q4G0X4 260 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 TMEM217Q8N7C4 229 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 Q8NAQ8 132 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 PINX1Q96BK5 328 aaKnown RBP7.76□□□□□ -1.17
USE1-203ENST00000593597 S100A16Q96FQ6 103 aaKnown RBP7.76□□□□□ -1.17
USE1-203ENST00000593597 TXN2Q99757 166 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 MS4A6AQ9H2W1 248 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 FAM212BQ9NTI7 297 aaPredicted RBP7.76□□□□□ -1.17
USE1-203ENST00000593597 FBXL17Q9UF56 701 aa7.76□□□□□ -1.17
USE1-203ENST00000593597 TRAV14DV4A0A0A6YYC5 116 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 A0A0G2JRQ6 117 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 CA1P00915 261 aaPredicted RBP7.75□□□□□ -1.17
USE1-203ENST00000593597 RBMY1A1P0DJD3 496 aaKnown RBP7.75□□□□□ -1.17
USE1-203ENST00000593597 RBMY1CP0DJD4 496 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 C4BPBP20851 252 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 PRSS3P35030 304 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 DEFB131AP59861 70 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 RBMY1FQ15415 496 aaKnown RBP7.75□□□□□ -1.17
USE1-203ENST00000593597 CMTM1Q8IZ96 169 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 OR6F1Q8NGZ6 308 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 C11orf45Q8TAV5 145 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 TSC22D3Q99576 134 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 FNDC4Q9H6D8 234 aaPredicted RBP7.75□□□□□ -1.17
USE1-203ENST00000593597 FKBP11Q9NYL4 201 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 APLNQ9ULZ1 77 aa7.75□□□□□ -1.17
USE1-203ENST00000593597 PUS1Q9Y606 427 aaKnown RBP eCLIP7.75□□□□□ -1.17
USE1-203ENST00000593597 A0A0B4J293 547 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 M0QYG6 137 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 GNG7O60262 68 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 TMEM50AO95807 157 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 RNASE2P10153 161 aaKnown RBP7.74□□□□□ -1.17
USE1-203ENST00000593597 PI3P19957 117 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 PPP5CP53041 499 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 UCP3P55916 312 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
USE1-203ENST00000593597 RBMS2Q15434 407 aaKnown RBP7.74□□□□□ -1.17
USE1-203ENST00000593597 MLANAQ16655 118 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 H2BFWTQ7Z2G1 175 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 LHFPL1Q86WI0 220 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 SNX29P2Q8IUI4 249 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 TSPAN14Q8NG11 270 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 TP53RKQ96S44 253 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 Q9H521 79 aa7.74□□□□□ -1.17
USE1-203ENST00000593597 IGHV4-28A0A0C4DH34 117 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 INS-IGF2F8WCM5 200 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 K7EQG2 157 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 ST8SIA3O43173 380 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 ELK1P19419 428 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 RND3P61587 244 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 NCS1P62166 190 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 ZNF600Q6ZNG1 722 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 TRPT1Q86TN4 253 aaKnown RBP7.73□□□□□ -1.17
USE1-203ENST00000593597 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 OR4A16Q8NH70 328 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 C6orf62Q9GZU0 229 aaPredicted RBP7.73□□□□□ -1.17
USE1-203ENST00000593597 X6R8D5 127 aa7.73□□□□□ -1.17
USE1-203ENST00000593597 ELOA3CA0A087WX78 387 aaPredicted RBP7.72□□□□□ -1.17
USE1-203ENST00000593597 TRAV2A0A0B4J234 112 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 KNCNA6PVL3 124 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 HPGDSO60760 199 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 RCVRNP35243 200 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 TMEM187Q14656 261 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 BSXQ3C1V8 233 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 RNASE12Q5GAN4 147 aaKnown RBP7.72□□□□□ -1.17
USE1-203ENST00000593597 Q6ZRM9 215 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 CSNK1G2-AS1Q8NCQ2 148 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 GINS3Q9BRX5 216 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 SCRT1Q9BWW7 348 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 MFFQ9GZY8 342 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 COMMD3Q9UBI1 195 aa7.72□□□□□ -1.17
USE1-203ENST00000593597 ZNF705EA8MWA4 302 aaPredicted RBP7.71□□□□□ -1.18
USE1-203ENST00000593597 IGKV1-17P01599 117 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms