RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 TMEM187Q14656 261 aa12.75□□□□□ -0.37
RETREG3-212ENST00000593251 FAM24BQ8N5W8 94 aa12.75□□□□□ -0.37
RETREG3-212ENST00000593251 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
RETREG3-212ENST00000593251 TXN2Q99757 166 aa12.75□□□□□ -0.37
RETREG3-212ENST00000593251 Q9H521 79 aa12.75□□□□□ -0.37
RETREG3-212ENST00000593251 IGLL5B9A064 214 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-212ENST00000593251 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 TMEM127O75204 238 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 DFFBO76075 338 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 EIF4EP06730 217 aaKnown RBP12.74□□□□□ -0.37
RETREG3-212ENST00000593251 TAS2R46P59540 309 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 TAS2R20P59543 309 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 PAFAH1B2P68402 229 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 SPINK9Q5DT21 86 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 S100A16Q96FQ6 103 aaKnown RBP12.74□□□□□ -0.37
RETREG3-212ENST00000593251 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 APLNQ9ULZ1 77 aa12.74□□□□□ -0.37
RETREG3-212ENST00000593251 IGKV1-39P01597 117 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 IGKV1D-39P04432 117 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 NAT1P18440 290 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 HLA-DMAP28067 261 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 HRH1P35367 487 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 RPL11P62913 178 aaKnown RBP12.73□□□□□ -0.37
RETREG3-212ENST00000593251 NEDD8Q15843 81 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 TMEM69Q5SWH9 247 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 H2BFWTQ7Z2G1 175 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 OR6F1Q8NGZ6 308 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 GINS3Q9BRX5 216 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 VSIRQ9H7M9 311 aa12.73□□□□□ -0.37
RETREG3-212ENST00000593251 PRCDQ00LT1 54 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 TBC1D26Q86UD7 250 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 SAMD12Q8N8I0 201 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 Q8NAQ8 132 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 ZNF114Q8NC26 417 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
RETREG3-212ENST00000593251 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
RETREG3-212ENST00000593251 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.37
RETREG3-212ENST00000593251 STHQ8IWL8 128 aa12.71□□□□□ -0.37
RETREG3-212ENST00000593251 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.37
RETREG3-212ENST00000593251 RABAC1Q9UI14 185 aa12.71□□□□□ -0.37
RETREG3-212ENST00000593251 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 A0A1B0GU03 582 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 RBMY1A1P0DJD3 496 aaKnown RBP12.7□□□□□ -0.38
RETREG3-212ENST00000593251 RBMY1CP0DJD4 496 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 S100GP29377 79 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 PRSS3P35030 304 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 TCTAP57738 103 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 HSPE1P61604 102 aaKnown RBP12.7□□□□□ -0.38
RETREG3-212ENST00000593251 TSPAN5P62079 268 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 RBMY1FQ15415 496 aaKnown RBP12.7□□□□□ -0.38
RETREG3-212ENST00000593251 CROCCP3Q8IVE0 287 aa12.7□□□□□ -0.38
RETREG3-212ENST00000593251 CD5P06127 495 aa12.69□□□□□ -0.38
RETREG3-212ENST00000593251 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-212ENST00000593251 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
RETREG3-212ENST00000593251 NPBWR1P48145 328 aa12.69□□□□□ -0.38
RETREG3-212ENST00000593251 ERHP84090 104 aaKnown RBP12.69□□□□□ -0.38
RETREG3-212ENST00000593251 ZNF600Q6ZNG1 722 aa12.69□□□□□ -0.38
RETREG3-212ENST00000593251 DUSP18Q8NEJ0 188 aa12.69□□□□□ -0.38
RETREG3-212ENST00000593251 FAM212BQ9NTI7 297 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-212ENST00000593251 C11orf94C9JXX5 98 aa12.68□□□□□ -0.38
RETREG3-212ENST00000593251 TMEM50AO95807 157 aa12.68□□□□□ -0.38
RETREG3-212ENST00000593251 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
RETREG3-212ENST00000593251 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
RETREG3-212ENST00000593251 Q6ZTC4 211 aa12.68□□□□□ -0.38
RETREG3-212ENST00000593251 STXBP6Q8NFX7 210 aa12.68□□□□□ -0.38
RETREG3-212ENST00000593251 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 KNCNA6PVL3 124 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 C4BPBP20851 252 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 PPP5CP53041 499 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 LSM3P62310 102 aaKnown RBP12.67□□□□□ -0.38
RETREG3-212ENST00000593251 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
RETREG3-212ENST00000593251 GPX8Q8TED1 209 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 HRH4Q9H3N8 390 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
RETREG3-212ENST00000593251 MRPL36Q9P0J6 103 aaKnown RBP12.67□□□□□ -0.38
RETREG3-212ENST00000593251 FAT2Q9NYQ8 4349 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 ELOA3CA0A087WX78 387 aaPredicted RBP12.66□□□□□ -0.38
RETREG3-212ENST00000593251 K7EQG2 157 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 NPPCP23582 126 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 SNCAP37840 140 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 SLC35G3Q8N808 338 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 TMEM231Q9H6L2 316 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 X6R8D5 127 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 DNAH17Q9UFH2 4485 aa12.66□□□□□ -0.38
RETREG3-212ENST00000593251 DNAH2Q9P225 4427 aa12.65□□□□□ -0.38
RETREG3-212ENST00000593251 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
RETREG3-212ENST00000593251 IGKV1-5P01602 117 aa12.65□□□□□ -0.38
RETREG3-212ENST00000593251 MIFP14174 115 aa12.65□□□□□ -0.38
RETREG3-212ENST00000593251 MLANAQ16655 118 aa12.65□□□□□ -0.38
RETREG3-212ENST00000593251 SNX29P2Q8IUI4 249 aa12.65□□□□□ -0.38
RETREG3-212ENST00000593251 TRAV10A0A0B4J240 114 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 M0QYG6 137 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms