RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
VMP1-217ENST00000593168 IGHV7-81A0A0B4J1V7 117 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 MDFIC2A0A1B0GVS7 189 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 IFNA5P01569 189 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 IER3P46695 156 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 DLK1P80370 383 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 TUSC1Q2TAM9 212 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 RNASEH2CQ8TDP1 164 aaKnown RBP10.64□□□□□ -0.71
VMP1-217ENST00000593168 SCARB1Q8WTV0 552 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 C22orf15Q8WYQ4 148 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 UQCC1Q9NVA1 299 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
VMP1-217ENST00000593168 FNDC10F2Z333 226 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 TSPAN9O75954 239 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 AMY1AP04745 511 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 CRYGCP07315 174 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 AREGP15514 252 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 GPX4P36969 197 aaPredicted RBP10.63□□□□□ -0.71
VMP1-217ENST00000593168 LY6EQ16553 131 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 TMEM219Q86XT9 240 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 OR1L6Q8NGR2 347 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 OR1P1Q8NH06 330 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 SCGB1C1Q8TD33 95 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 ABHD5Q8WTS1 349 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
VMP1-217ENST00000593168 ZNF48Q96MX3 618 aaPredicted RBP10.63□□□□□ -0.71
VMP1-217ENST00000593168 BTBD17A6NE02 478 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 CORTO00230 105 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 IGHV4-59P01825 116 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 SPP1P10451 314 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 CTRB1P17538 263 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 NDPQ00604 133 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 CD69Q07108 199 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 CTRB2Q6GPI1 263 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 SLC25A24Q6NUK1 477 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 SGMS2Q8NHU3 365 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 GNPNAT1Q96EK6 184 aaPredicted RBP10.62□□□□□ -0.71
VMP1-217ENST00000593168 HSPB9Q9BQS6 159 aa10.62□□□□□ -0.71
VMP1-217ENST00000593168 WDR61Q9GZS3 305 aaKnown RBP10.62□□□□□ -0.71
VMP1-217ENST00000593168 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
VMP1-217ENST00000593168 PKD1L1Q8TDX9 2849 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 NPIPB5A8MRT5 1133 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 REG1AP05451 166 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 EGR2P11161 476 aaPredicted RBP10.61□□□□□ -0.71
VMP1-217ENST00000593168 MDKP21741 143 aaPredicted RBP10.61□□□□□ -0.71
VMP1-217ENST00000593168 ATP6V0CP27449 155 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 TTC9CQ8N5M4 171 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 TAF15Q92804 592 aaKnown RBP eCLIP10.61□□□□□ -0.71
VMP1-217ENST00000593168 FAM103A1Q9BTL3 118 aaKnown RBP10.61□□□□□ -0.71
VMP1-217ENST00000593168 WNT10AQ9GZT5 417 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 NPVFQ9HCQ7 196 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 WDR83OSQ9Y284 106 aa10.61□□□□□ -0.71
VMP1-217ENST00000593168 MGAM2Q2M2H8 2515 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 UBE2L5PA0A1B0GUS4 154 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 FBXO24O75426 580 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 APELAP0DMC3 54 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 CRIP2P52943 208 aaPredicted RBP10.6□□□□□ -0.71
VMP1-217ENST00000593168 MFAP2P55001 183 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
VMP1-217ENST00000593168 ASPHD1Q5U4P2 390 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 CENPVQ7Z7K6 275 aaPredicted RBP10.6□□□□□ -0.71
VMP1-217ENST00000593168 TMEM86BQ8N661 226 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 C3orf56Q8N813 242 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 LFNGQ8NES3 379 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 LRRC20Q8TCA0 184 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 PSMG3Q9BT73 122 aaPredicted RBP10.6□□□□□ -0.71
VMP1-217ENST00000593168 SLC25A32Q9H2D1 315 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 VPREB3Q9UKI3 123 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 FBXO7Q9Y3I1 522 aa10.6□□□□□ -0.71
VMP1-217ENST00000593168 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 MPDU1O75352 247 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 RAB14P61106 215 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 KLK9Q2XQG4 91 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 AKIRIN2Q53H80 203 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 ETFRF1Q6IPR1 90 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 PARP11Q9NR21 331 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 TIMM9Q9Y5J7 89 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 TRRAPQ9Y4A5 3859 aa10.59□□□□□ -0.71
VMP1-217ENST00000593168 TGP01266 2768 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 RPS10-NUDT3A0A1W2PQS6 291 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 CYB5BO43169 146 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 SOX15O60248 233 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 IGHG2P01859 326 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 IGF1P05019 195 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 DEFA4P12838 97 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 FGF7P21781 194 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 SULT1A2P50226 295 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 RAB5CP51148 216 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 SERF2P84101 59 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 RUNX1Q01196 453 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms