RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 M0QYG6 137 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 ZNF207O43670 478 aaKnown RBP9.83□□□□□ -0.84
APOC1-209ENST00000592885 B3GALNT1O75752 331 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 PGAM2P15259 253 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 NPBWR1P48145 328 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 AKR1C2P52895 323 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 LYG2Q86SG7 212 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 RNF2Q99496 336 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 MAP6D1Q9H9H5 199 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 MTFP1Q9UDX5 166 aa9.83□□□□□ -0.84
APOC1-209ENST00000592885 ALMS1Q8TCU4 4167 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 IGHV3OR16-8A0A075B7F1 116 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 TRAV14DV4A0A0A6YYC5 116 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 CXorf65A6NEN9 183 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 YIF1AO95070 293 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 P0C879 139 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 ZNF182P17025 639 aaPredicted RBP9.82□□□□□ -0.84
APOC1-209ENST00000592885 PIGPP57054 158 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 SLC35G3Q8N808 338 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 CCDC71LQ8N9Z2 235 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 DUSP18Q8NEJ0 188 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 ZFAND1Q8TCF1 268 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 LINC00476Q8WZB0 136 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 PDCD10Q9BUL8 212 aa9.82□□□□□ -0.84
APOC1-209ENST00000592885 TRAV2A0A0B4J234 112 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 C3orf85A0A1B0GTC6 90 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 SCGB2A1O75556 95 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 IGKV1-5P01602 117 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 CD74P04233 296 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 CD3DP04234 171 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 SNCAP37840 140 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 SUB1P53999 127 aaKnown RBP eCLIP9.81□□□□□ -0.84
APOC1-209ENST00000592885 TAS2R19P59542 299 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 PAFAH1B2P68402 229 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 SSBP1Q04837 148 aaKnown RBP9.81□□□□□ -0.84
APOC1-209ENST00000592885 CTF1Q16619 201 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 FAM90A2PQ658T7 463 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 ZNF600Q6ZNG1 722 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 OR52I2Q8NH67 350 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 GATAD1Q8WUU5 269 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 PINX1Q96BK5 328 aaKnown RBP9.81□□□□□ -0.84
APOC1-209ENST00000592885 TP53RKQ96S44 253 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 TMEM231Q9H6L2 316 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 EXTL2Q9UBQ6 330 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 KLK11Q9UBX7 282 aa9.81□□□□□ -0.84
APOC1-209ENST00000592885 ST8SIA3O43173 380 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 RPL35AP18077 110 aaKnown RBP9.8□□□□□ -0.84
APOC1-209ENST00000592885 UCP1P25874 307 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 MRPS10P82664 201 aaKnown RBP9.8□□□□□ -0.84
APOC1-209ENST00000592885 FAM219AQ8IW50 185 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 TMEM229BQ8NBD8 167 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 TERB2Q8NHR7 220 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 VSIRQ9H7M9 311 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 COPZ2Q9P299 210 aa9.8□□□□□ -0.84
APOC1-209ENST00000592885 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
APOC1-209ENST00000592885 EPPK1P58107 5090 aaKnown RBP9.79□□□□□ -0.84
APOC1-209ENST00000592885 A0A0B4J293 547 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 DFFBO76075 338 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 IFNA17P01571 189 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 PI3P19957 117 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 HOXA1P49639 335 aaPredicted RBP9.79□□□□□ -0.84
APOC1-209ENST00000592885 PPP5CP53041 499 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 TRIM16LQ309B1 348 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 AARDQ4LEZ3 155 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 RNASE12Q5GAN4 147 aaKnown RBP9.79□□□□□ -0.84
APOC1-209ENST00000592885 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
APOC1-209ENST00000592885 CEMP1Q6PRD7 247 aaPredicted RBP9.79□□□□□ -0.84
APOC1-209ENST00000592885 TOMM20LQ6UXN7 152 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 TCF24Q7RTU0 167 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 RRNAD1Q96FB5 475 aaKnown RBP9.79□□□□□ -0.84
APOC1-209ENST00000592885 CSTL1Q9H114 145 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 ENY2Q9NPA8 101 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 BIRC6Q9NR09 4857 aa9.79□□□□□ -0.84
APOC1-209ENST00000592885 IGHV3-49A0A0A0MS15 119 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 MPTX1A8MV57 137 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 GABARAPH6UMI1 98 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 RAB3DO95716 219 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 SMIM18P0DKX4 95 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 RNASE2P10153 161 aaKnown RBP9.78□□□□□ -0.84
APOC1-209ENST00000592885 RPL5P46777 297 aaKnown RBP9.78□□□□□ -0.84
APOC1-209ENST00000592885 MEF2DQ14814 521 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 SURF2Q15527 256 aaPredicted RBP9.78□□□□□ -0.84
APOC1-209ENST00000592885 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 SPINK9Q5DT21 86 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 GPR107Q5VW38 600 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 RNASE11Q8TAA1 199 aaKnown RBP9.78□□□□□ -0.84
APOC1-209ENST00000592885 ST8SIA2Q92186 375 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 ABHD1Q96SE0 405 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
APOC1-209ENST00000592885 RABL2AQ9UBK7 228 aaPredicted RBP9.78□□□□□ -0.84
APOC1-209ENST00000592885 RABL2BQ9UNT1 228 aa9.78□□□□□ -0.84
APOC1-209ENST00000592885 PUS1Q9Y606 427 aaKnown RBP eCLIP9.78□□□□□ -0.84
APOC1-209ENST00000592885 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms