RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PLCE1Q9P212 2302 aa9.43□□□□□ -0.9
ZNF540-210ENST00000592533 USF2Q15853 346 aaPredicted RBP9.43□□□□□ -0.9
ZNF540-210ENST00000592533 SLC25A2Q9BXI2 301 aa9.43□□□□□ -0.9
ZNF540-210ENST00000592533 H0YJW9 148 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 M0R143 59 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 CD40P25942 277 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 Q6ZS92 163 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 TGIF2LXQ8IUE1 241 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 DEFB124Q8NES8 71 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 OR9G1Q8NH87 305 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 COMMD5Q9GZQ3 224 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 CDC42EP3Q9UKI2 254 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 OR7C2O60412 319 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 APOA2P02652 100 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 COMPP49747 757 aaPredicted RBP9.42□□□□□ -0.9
ZNF540-210ENST00000592533 RPRMLQ8N4K4 120 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 OR5AU1Q8NGC0 362 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 NBEAQ8NFP9 2946 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 LOC400499M0QZD8 3231 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 NKX6-3A6NJ46 265 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 IRF2P14316 349 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 USF1P22415 310 aaPredicted RBP9.42□□□□□ -0.9
ZNF540-210ENST00000592533 RASL11AQ6T310 242 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 DOLPP1Q86YN1 238 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
ZNF540-210ENST00000592533 WIPF2Q8TF74 440 aaPredicted RBP9.42□□□□□ -0.9
ZNF540-210ENST00000592533 MRPL20Q9BYC9 149 aaKnown RBP9.42□□□□□ -0.9
ZNF540-210ENST00000592533 SPAARA0A1B0GVQ0 90 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 A0A1W2PN81 502 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
ZNF540-210ENST00000592533 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 RNASE7Q9H1E1 156 aaKnown RBP9.41□□□□□ -0.9
ZNF540-210ENST00000592533 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 CBLN4Q9NTU7 201 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 M0QZK8 103 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 AMY1AP04745 511 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 REG1AP05451 166 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 GPX1P07203 203 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 BAGE3Q86Y29 109 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 BAGE2Q86Y30 109 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 THAP8Q8NA92 274 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 DEFB108BQ8NET1 73 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 HARBI1Q96MB7 349 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 SVILO95425 2214 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
ZNF540-210ENST00000592533 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 F2Z2F3 143 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 GATA2P23769 480 aaPredicted RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 BRS3P32247 399 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 TDGF1P3P51864 188 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 PDPNQ86YL7 162 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 OR10W1Q8NGF6 305 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 ZNRD1Q9P1U0 126 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 FSTL3O95633 263 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 TNFRSF1AP19438 455 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 SUMO1P63165 101 aaKnown RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 C22orf34Q6ZV56 151 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 SNRNP40Q96DI7 357 aaKnown RBP9.4□□□□□ -0.9
ZNF540-210ENST00000592533 PARD6AQ9NPB6 346 aa9.4□□□□□ -0.9
ZNF540-210ENST00000592533 IZUMO1RA6ND01 250 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 CGB1A6NKQ9 187 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 TCAPO15273 167 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 CDKN1AP38936 164 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF137PP52743 207 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 MLANAQ16655 118 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 ALKBH2Q6NS38 261 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 Q8N976 141 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 KCNS1Q96KK3 526 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 NAT8BQ9UHF3 227 aa9.4□□□□□ -0.91
ZNF540-210ENST00000592533 TNFRSF13BO14836 293 aaPredicted RBP9.39□□□□□ -0.91
ZNF540-210ENST00000592533 FCN3O75636 299 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 OR4C13Q8NGP0 309 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 OR1L4Q8NGR5 311 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 DCAF16Q9NXF7 216 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 IGLV2-23P01705 113 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 CRYABP02511 175 aaKnown RBP9.39□□□□□ -0.91
ZNF540-210ENST00000592533 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
ZNF540-210ENST00000592533 MORN5Q5VZ52 161 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 FAM57AQ8TBR7 257 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 RND1Q92730 232 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 ST6GALNAC6Q969X2 333 aa9.39□□□□□ -0.91
ZNF540-210ENST00000592533 FLYWCH2Q96CP2 140 aaKnown RBP9.39□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF430Q9H8G1 570 aaPredicted RBP9.39□□□□□ -0.91
ZNF540-210ENST00000592533 IGKV1D-37A0A075B6S9 117 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms