RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 HOXA1P49639 335 aaPredicted RBP11□□□□□ -0.65
DDX39A-217ENST00000592391 SPCS3P61009 180 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 SRPXP78539 464 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 Q56UQ5 140 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 TMEM128Q5BJH2 165 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 UNQ9165/PRO28630Q6UXU0 137 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 TMED4Q7Z7H5 227 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 DYNLRB2Q8TF09 96 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
DDX39A-217ENST00000592391 ZNF436Q9C0F3 470 aaPredicted RBP11□□□□□ -0.65
DDX39A-217ENST00000592391 ENY2Q9NPA8 101 aa11□□□□□ -0.65
DDX39A-217ENST00000592391 GAR1Q9NY12 217 aaKnown RBP11□□□□□ -0.65
DDX39A-217ENST00000592391 DNAH9Q9NYC9 4486 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 A0A0B4J2A0 478 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 IZUMO1RA6ND01 250 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 MT-CO2P00403 227 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 CBLN1P23435 193 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
DDX39A-217ENST00000592391 RBMS2Q15434 407 aaKnown RBP10.99□□□□□ -0.65
DDX39A-217ENST00000592391 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
DDX39A-217ENST00000592391 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 LGI3Q8N145 548 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 PINX1Q96BK5 328 aaKnown RBP10.99□□□□□ -0.65
DDX39A-217ENST00000592391 TXN2Q99757 166 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 CHRDL1Q9BU40 450 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 PALMDQ9NP74 551 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 TECRQ9NZ01 308 aaKnown RBP10.99□□□□□ -0.65
DDX39A-217ENST00000592391 SHPKQ9UHJ6 478 aa10.99□□□□□ -0.65
DDX39A-217ENST00000592391 PIGBOS1A0A0B4J2F0 54 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 NAP1L6A6NFF2 107 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 SULT1A3P0DMM9 295 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 SULT1A4P0DMN0 295 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 RNASE2P10153 161 aaKnown RBP10.98□□□□□ -0.65
DDX39A-217ENST00000592391 ADMP35318 185 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.65
DDX39A-217ENST00000592391 MFAP4P55083 255 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 ELLP55199 621 aaPredicted RBP10.98□□□□□ -0.65
DDX39A-217ENST00000592391 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 NMSQ5H8A3 153 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 LYZL2Q7Z4W2 148 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 Q8N1Y9 231 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 CACNG8Q8WXS5 425 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 TMEM190Q8WZ59 177 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 MARC2Q969Z3 335 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 CACFD1Q9UGQ2 172 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
DDX39A-217ENST00000592391 CORTO00230 105 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 NDUFA4O00483 81 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 IGHV3-48P01763 117 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 CTSGP08311 255 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 NHLRC4P0CG21 123 aaPredicted RBP10.97□□□□□ -0.65
DDX39A-217ENST00000592391 C8orf88P0DMB2 117 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 VAMP1P23763 118 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 CCR6P51684 374 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 BSXQ3C1V8 233 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 GTSCR1Q86UQ5 136 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 CENPSQ8N2Z9 138 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 UXS1Q8NBZ7 420 aa10.97□□□□□ -0.65
DDX39A-217ENST00000592391 NUPL2O15504 423 aaKnown RBP10.96□□□□□ -0.65
DDX39A-217ENST00000592391 NDUFB6O95139 128 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 IL7P13232 177 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 HTR2BP41595 481 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 SMCO1Q147U7 214 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 C11orf87Q6NUJ2 197 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 LRTM2Q8N967 370 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.65
DDX39A-217ENST00000592391 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.65
DDX39A-217ENST00000592391 MRPL27Q9P0M9 148 aaKnown RBP10.96□□□□□ -0.65
DDX39A-217ENST00000592391 MLXQ9UH92 298 aa10.96□□□□□ -0.65
DDX39A-217ENST00000592391 COL7A1Q02388 2944 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 LINC00854A0A1B0GVQ3 168 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 ZNF785A8K8V0 405 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 CENPXA8MT69 81 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 CEBPZOSA8MTT3 80 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 GNG7O60262 68 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 SFT2D2O95562 160 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 IGHV4-30-4P0DP06 118 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 NPBWR1P48145 328 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 UBE2MP61081 183 aaKnown RBP10.95□□□□□ -0.66
DDX39A-217ENST00000592391 RELQ04864 619 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-217ENST00000592391 PPP1R1AQ13522 171 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 BTNL8Q6UX41 500 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 DUSP18Q8NEJ0 188 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 ASCL2Q99929 193 aa10.95□□□□□ -0.66
DDX39A-217ENST00000592391 C7orf50Q9BRJ6 194 aaKnown RBP10.95□□□□□ -0.66
DDX39A-217ENST00000592391 A0A1B0GU03 582 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 A8MZ25 164 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 K7EMT4 169 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 NXPH3O95157 252 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 TNFRSF9Q07011 255 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 GUCA2BQ16661 112 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 C2orf83Q53S99 150 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 LINC00299Q6ZSB3 139 aa10.94□□□□□ -0.66
DDX39A-217ENST00000592391 TMEM61Q8N0U2 210 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms