RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TMEM230Q96A57 120 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 SCGB3A2Q96PL1 93 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 MLXQ9UH92 298 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 UFC1Q9Y3C8 167 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 C8orf88P0DMB2 117 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 FCGR2BP31994 310 aaPredicted RBP20.53■□□□□ 0.88
SMAD4-213ENST00000591914 ADMP35318 185 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 UBAC2Q8NBM4 344 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 GALNT14Q96FL9 552 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 WWC2-AS2Q96NR7 200 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 PDCD10Q9BUL8 212 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 GAR1Q9NY12 217 aaKnown RBP20.53■□□□□ 0.88
SMAD4-213ENST00000591914 TMEM56-RWDD3S4R434 201 aa20.53■□□□□ 0.88
SMAD4-213ENST00000591914 HUWE1Q7Z6Z7 4374 aaKnown RBP20.53■□□□□ 0.88
SMAD4-213ENST00000591914 STAB2Q8WWQ8 2551 aa20.52■□□□□ 0.88
SMAD4-213ENST00000591914 FAUP35544 74 aaKnown RBP20.52■□□□□ 0.88
SMAD4-213ENST00000591914 AP3S2P59780 193 aa20.52■□□□□ 0.88
SMAD4-213ENST00000591914 Q56UQ5 140 aa20.52■□□□□ 0.88
SMAD4-213ENST00000591914 NDUFA4O00483 81 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 MT-CO2P00403 227 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 CTSGP08311 255 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 SNCAP37840 140 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 ETV6P41212 452 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 TMEM268Q5VZI3 342 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 ZNF57Q68EA5 555 aaPredicted RBP20.51■□□□□ 0.87
SMAD4-213ENST00000591914 PVRIGQ6DKI7 326 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 TMEM61Q8N0U2 210 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 TOMM5Q8N4H5 51 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 WDR89Q96FK6 387 aaPredicted RBP20.51■□□□□ 0.87
SMAD4-213ENST00000591914 TXN2Q99757 166 aa20.51■□□□□ 0.87
SMAD4-213ENST00000591914 MRPL27Q9P0M9 148 aaKnown RBP20.51■□□□□ 0.87
SMAD4-213ENST00000591914 MFAP4P55083 255 aa20.5■□□□□ 0.87
SMAD4-213ENST00000591914 TMEM187Q14656 261 aa20.5■□□□□ 0.87
SMAD4-213ENST00000591914 IL22RA2Q969J5 263 aa20.5■□□□□ 0.87
SMAD4-213ENST00000591914 DAZ1Q9NQZ3 744 aaKnown RBP20.5■□□□□ 0.87
SMAD4-213ENST00000591914 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.5■□□□□ 0.87
SMAD4-213ENST00000591914 KCNIP3Q9Y2W7 256 aa20.5■□□□□ 0.87
SMAD4-213ENST00000591914 TENM3Q9P273 2699 aa20.5■□□□□ 0.87
SMAD4-213ENST00000591914 HOXA1P49639 335 aaPredicted RBP20.49■□□□□ 0.87
SMAD4-213ENST00000591914 CD81P60033 236 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 GUCA2BQ16661 112 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 BTNL8Q6UX41 500 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 OR52E5Q8NH55 327 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 DEDD2Q8WXF8 326 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 GPR146Q96CH1 333 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 ZNF414Q96IQ9 312 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 NEURL2Q9BR09 285 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 SELENOKQ9Y6D0 94 aa20.49■□□□□ 0.87
SMAD4-213ENST00000591914 RNASE2P10153 161 aaKnown RBP20.48■□□□□ 0.87
SMAD4-213ENST00000591914 SPCS3P61009 180 aa20.48■□□□□ 0.87
SMAD4-213ENST00000591914 SUPT4H1P63272 117 aaKnown RBP20.48■□□□□ 0.87
SMAD4-213ENST00000591914 SPANXN2Q5MJ10 180 aa20.48■□□□□ 0.87
SMAD4-213ENST00000591914 PINX1Q96BK5 328 aaKnown RBP20.48■□□□□ 0.87
SMAD4-213ENST00000591914 CACNG5Q9UF02 275 aa20.48■□□□□ 0.87
SMAD4-213ENST00000591914 NUPL2O15504 423 aaKnown RBP20.47■□□□□ 0.87
SMAD4-213ENST00000591914 IGHV3-48P01763 117 aa20.47■□□□□ 0.87
SMAD4-213ENST00000591914 CD7P09564 240 aa20.47■□□□□ 0.87
SMAD4-213ENST00000591914 AKR1C4P17516 323 aa20.47■□□□□ 0.87
SMAD4-213ENST00000591914 BSXQ3C1V8 233 aa20.47■□□□□ 0.87
SMAD4-213ENST00000591914 TM2D3Q9BRN9 247 aa20.47■□□□□ 0.87
SMAD4-213ENST00000591914 ENY2Q9NPA8 101 aa20.47■□□□□ 0.87
SMAD4-213ENST00000591914 SUB1P53999 127 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMAD4-213ENST00000591914 RELQ04864 619 aaPredicted RBP20.46■□□□□ 0.87
SMAD4-213ENST00000591914 RCHY1Q96PM5 261 aa20.46■□□□□ 0.87
SMAD4-213ENST00000591914 SRRQ9GZT4 340 aa20.46■□□□□ 0.87
SMAD4-213ENST00000591914 TUBA4BQ9H853 241 aa20.46■□□□□ 0.87
SMAD4-213ENST00000591914 PRR13Q9NZ81 148 aa20.46■□□□□ 0.87
SMAD4-213ENST00000591914 TRAV25A0A0B4J276 109 aa20.45■□□□□ 0.86
SMAD4-213ENST00000591914 K7EMT4 169 aa20.45■□□□□ 0.86
SMAD4-213ENST00000591914 CORTO00230 105 aa20.45■□□□□ 0.86
SMAD4-213ENST00000591914 C20orf24Q9BUV8 137 aa20.45■□□□□ 0.86
SMAD4-213ENST00000591914 ZMAT4Q9H898 229 aa20.45■□□□□ 0.86
SMAD4-213ENST00000591914 C15orf62A8K5M9 175 aa20.44■□□□□ 0.86
SMAD4-213ENST00000591914 GNG7O60262 68 aa20.44■□□□□ 0.86
SMAD4-213ENST00000591914 IGHV3OR16-8A0A075B7F1 116 aa20.43■□□□□ 0.86
SMAD4-213ENST00000591914 A0A0B4J2A0 478 aa20.43■□□□□ 0.86
SMAD4-213ENST00000591914 SCAF4O95104 1147 aaKnown RBP20.43■□□□□ 0.86
SMAD4-213ENST00000591914 SLC25A21Q9BQT8 299 aaPredicted RBP20.43■□□□□ 0.86
SMAD4-213ENST00000591914 SHPKQ9UHJ6 478 aa20.43■□□□□ 0.86
SMAD4-213ENST00000591914 ANXA3P12429 323 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 NPBWR1P48145 328 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 SRPXP78539 464 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 HAGHQ16775 308 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 NMSQ5H8A3 153 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 LINC00322Q6ZN03 302 aaPredicted RBP20.42■□□□□ 0.86
SMAD4-213ENST00000591914 RBPMS2Q6ZRY4 209 aaKnown RBP20.42■□□□□ 0.86
SMAD4-213ENST00000591914 SLC16A13Q7RTY0 426 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 DUSP18Q8NEJ0 188 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 OR10C1Q96KK4 312 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 WFDC10AQ9H1F0 79 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 CACFD1Q9UGQ2 172 aa20.42■□□□□ 0.86
SMAD4-213ENST00000591914 OR11H12B2RN74 326 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 SULT1A3P0DMM9 295 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 SULT1A4P0DMN0 295 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 HTR2BP41595 481 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 TMEM128Q5BJH2 165 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 LYZL2Q7Z4W2 148 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 TMED4Q7Z7H5 227 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 LGI3Q8N145 548 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 DEFB125Q8N687 156 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms