RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 GNG7O60262 68 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 MT-CO2P00403 227 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 HLA-DQB1P01920 261 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 GABRB1P18505 474 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 CRYBB3P26998 211 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 ETV1P50549 477 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 PPP5CP53041 499 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 OR5I1Q13606 314 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 LELP1Q5T871 98 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 Q6ZSA8 131 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 HSD17B13Q7Z5P4 300 aaPredicted RBP4.35□□□□□ -1.71
DNMT1-222ENST00000590619 NFE4Q86UQ8 179 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 SPATA24Q86W54 205 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 NKAIN3Q8N8D7 197 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 ZFP41Q8N8Y5 198 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 MOB3AQ96BX8 217 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 PGLYRP3Q96LB9 341 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 Q96MT0 163 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 DERL3Q96Q80 235 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 HSD17B10Q99714 261 aaKnown RBP4.35□□□□□ -1.71
DNMT1-222ENST00000590619 GABARAPL1Q9H0R8 117 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 DCSTAMPQ9H295 470 aa4.35□□□□□ -1.71
DNMT1-222ENST00000590619 MRPS18AQ9NVS2 196 aaKnown RBP4.35□□□□□ -1.71
DNMT1-222ENST00000590619 IGKV1D-13A0A0B4J2D9 117 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 LRCOL1A6NCL2 159 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 EBAG9O00559 213 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 SIVA1O15304 175 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 TMEM50AO95807 157 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 FCGR3AP08637 254 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 IGKV1-13P0DP09 117 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 CD36P16671 472 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 AZU1P20160 251 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 NFYAP23511 347 aaPredicted RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 HNRNPA3P51991 378 aaKnown RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 SNRPD3P62318 126 aaKnown RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 POU2AF1Q16633 256 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 THOC7Q6I9Y2 204 aaKnown RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 ZNF600Q6ZNG1 722 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 CADM3Q8N126 398 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 OR1L8Q8NGR8 309 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 OR1P1Q8NH06 330 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 MISP3Q96FF7 219 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 CLUHP3Q96NS8 147 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 AIFM2Q9BRQ8 373 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 URM1Q9BTM9 101 aaKnown RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 HINT2Q9BX68 163 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 SEPSECSQ9HD40 501 aaKnown RBP4.34□□□□□ -1.71
DNMT1-222ENST00000590619 TAS2R8Q9NYW2 309 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 OR2W1Q9Y3N9 320 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 U3KQE9 123 aa4.34□□□□□ -1.71
DNMT1-222ENST00000590619 M0QYG6 137 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 SLC22A5O76082 557 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 BPNT1O95861 308 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 FGF2P09038 288 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 M6PRP20645 277 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 RASSF2P50749 326 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 AP2S1P53680 142 aaPredicted RBP4.33□□□□□ -1.72
DNMT1-222ENST00000590619 TAS2R31P59538 309 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 PSG9Q00887 426 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 KCTD21Q4G0X4 260 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 ACSM3Q53FZ2 586 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 TTC23Q5W5X9 447 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 TMPRSS11AQ6ZMR5 421 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 AMIGO2Q86SJ2 522 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 SPAG16Q8N0X2 631 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 OR4B1Q8NGF8 309 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
DNMT1-222ENST00000590619 LSM10Q969L4 123 aaKnown RBP4.33□□□□□ -1.72
DNMT1-222ENST00000590619 DAZAP1Q96EP5 407 aaKnown RBP4.33□□□□□ -1.72
DNMT1-222ENST00000590619 METTL26Q96S19 204 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 SAV1Q9H4B6 383 aaPredicted RBP4.33□□□□□ -1.72
DNMT1-222ENST00000590619 FGF20Q9NP95 211 aaPredicted RBP4.33□□□□□ -1.72
DNMT1-222ENST00000590619 TMEM140Q9NV12 185 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 CLEC2DQ9UHP7 191 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 MUC2Q02817 5179 aa4.33□□□□□ -1.72
DNMT1-222ENST00000590619 ZNF701M0R085 212 aaPredicted RBP4.32□□□□□ -1.72
DNMT1-222ENST00000590619 TNFSF12O43508 249 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 HPRT1P00492 218 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 NQO2P16083 231 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 HOXA5P20719 270 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 GYS2P54840 703 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 INSL4Q14641 139 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 ZNF79Q15937 498 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 ZNF485Q8NCK3 441 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 OR4C16Q8NGL9 310 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 RHOXF1Q8NHV9 184 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 ARL2BPQ9Y2Y0 163 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 NSG2Q9Y328 171 aa4.32□□□□□ -1.72
DNMT1-222ENST00000590619 A0A096LPF7 62 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 PNMA8CA0A1B0GUJ8 204 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 H3BNG1 76 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 SULT1C2O00338 296 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 MFNGO00587 321 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 TSPOP30536 169 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 NPBWR1P48145 328 aa4.31□□□□□ -1.72
DNMT1-222ENST00000590619 EIF2B2P49770 351 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms