RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 PRSS1P07477 247 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 CA7P43166 264 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 BSPH1Q075Z2 132 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 UFC1Q9Y3C8 167 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 ZCCHC24Q8N2G6 241 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 OR10W1Q8NGF6 305 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 PLSCR4Q9NRQ2 329 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 FOXA2Q9Y261 457 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 NDUFS6O75380 124 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 PYYP10082 97 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 MYOD1P15172 320 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 MEF2CQ06413 473 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 GNG5P63218 68 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 TMEM256Q8N2U0 113 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 CLEC7AQ9BXN2 247 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 NRN1Q9NPD7 142 aa14.15□□□□□ -0.14
SMARCA4-215ENST00000590574 PPOXP50336 477 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 Q6ZSR3 168 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 ZNF738Q8NE65 137 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 RNASEH2CQ8TDP1 164 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 ELOVL5Q9NYP7 299 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 IGKV1D-17A0A075B6S4 117 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 TMEM97Q5BJF2 176 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 HAPLN4Q86UW8 402 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 MIEN1Q9BRT3 115 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 TWIST1Q15672 202 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 ECSCRQ19T08 205 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 CLEC5AQ9NY25 188 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 RALYQ9UKM9 306 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 GFRA3O60609 400 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 GOSR1O95249 250 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 CYB5R2Q6BCY4 276 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 DTX1Q86Y01 620 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 OSTCQ9NRP0 149 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 IGHV1-46P01743 117 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 CD69Q07108 199 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 DENND4AQ7Z401 1863 aa14.14□□□□□ -0.15
SMARCA4-215ENST00000590574 TRAV5A0A0B4J249 113 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 C17orf100A8MU93 164 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 CCL21O00585 134 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 IGKV1D-33P01593 117 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 IGKV1-33P01594 117 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 PNKDQ8N490 385 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 CDC42EP3Q9UKI2 254 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 CA1P00915 261 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 OR4A5Q8NH83 315 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 C14orf144Q96I85 54 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 FGF23Q9GZV9 251 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 CHODLQ9H9P2 273 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 GNB1LQ9BYB4 327 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 C1RLQ9NZP8 487 aa14.13□□□□□ -0.15
SMARCA4-215ENST00000590574 HIGD1CA8MV81 97 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 A0A1W2PRE2 83 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 FAM57AQ8TBR7 257 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 FBXL15Q9H469 300 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 TPRP12270 2363 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 PFN1P07737 140 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 GZMBP10144 247 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 PRB3Q04118 309 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 SSBP4Q9BWG4 385 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 IGHV2-70P01814 119 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 COMPP49747 757 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 ARF6P62330 175 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 C21orf62-AS1Q17RA5 79 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 CCDC144NLQ6NUI1 221 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 SLC25A15Q9Y619 301 aa14.12□□□□□ -0.15
SMARCA4-215ENST00000590574 KRTAP27-1Q3LI81 207 aa14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 J3KRW8 73 aa14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 ERVK11-1P61568 191 aa14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 Q8NFD4 153 aa14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 RPP21Q9H633 154 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 TMEM131Q92545 1883 aa14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 IGKV3-15P01624 115 aa14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 SRSF6Q13247 344 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-215ENST00000590574 TMEM70Q9BUB7 260 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 IL4P05112 153 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 SMIM17P0DL12 118 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 ZNF664Q8N3J9 261 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 SLC25A33Q9BSK2 321 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 F2RL2O00254 374 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 RPUSD1Q9UJJ7 312 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 TCRBV4S1A1TA0A5B7 111 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 LMO1P25800 156 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 SLC25A34Q6PIV7 304 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 FMC1Q96HJ9 113 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 ZFP30Q9Y2G7 519 aa14.1□□□□□ -0.15
SMARCA4-215ENST00000590574 C9JCJ5 164 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 Q9H3A6 140 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 ZNF257Q9Y2Q1 563 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 S4R3C0 116 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 LEMD1Q68G75 181 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 ZNF788Q6ZQV5 615 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 MFAP4P55083 255 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 LHFPL4Q7Z7J7 247 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 TMEM116Q8NCL8 245 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 ZNF407Q9C0G0 2248 aa14.09□□□□□ -0.15
SMARCA4-215ENST00000590574 UBTD1Q9HAC8 227 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms