RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ZNF705AQ6ZN79 300 aaPredicted RBP10.07□□□□□ -0.8
PDE4A-207ENST00000590407 PIP4P1Q86T03 277 aa10.07□□□□□ -0.8
PDE4A-207ENST00000590407 DOLPP1Q86YN1 238 aa10.07□□□□□ -0.8
PDE4A-207ENST00000590407 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
PDE4A-207ENST00000590407 ASCL3Q9NQ33 180 aa10.07□□□□□ -0.8
PDE4A-207ENST00000590407 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
PDE4A-207ENST00000590407 F2Z2F3 143 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 BMPR1BO00238 502 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 IGHV1-46P01743 117 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 APOA2P02652 100 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 CTRLP40313 264 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 SUMO1P63165 101 aaKnown RBP10.06□□□□□ -0.8
PDE4A-207ENST00000590407 ERHP84090 104 aaKnown RBP10.06□□□□□ -0.8
PDE4A-207ENST00000590407 C19orf35Q6ZS72 473 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 C8orf31Q8N9H6 132 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 OR5AN1Q8NGI8 311 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 OR1L4Q8NGR5 311 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 CHRDL1Q9BU40 450 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 SLC25A2Q9BXI2 301 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 RNASE7Q9H1E1 156 aaKnown RBP10.06□□□□□ -0.8
PDE4A-207ENST00000590407 DNAJC4Q9NNZ3 241 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 FREM2Q5SZK8 3169 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 FRYLO94915 3013 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 A0A1W2PS18 150 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF253O75346 499 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF324O75467 553 aaPredicted RBP10.06□□□□□ -0.8
PDE4A-207ENST00000590407 USF1P22415 310 aaPredicted RBP10.06□□□□□ -0.8
PDE4A-207ENST00000590407 FAM201AQ5SY85 155 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 MOB3BQ86TA1 216 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 THAP8Q8NA92 274 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 NUP37Q8NFH4 326 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 OR9G1Q8NH87 305 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 TMEM167AQ8TBQ9 72 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 VN1R17PQ8TDU5 208 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 ATG101Q9BSB4 218 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 GAL3ST2Q9H3Q3 398 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
PDE4A-207ENST00000590407 TBL2Q9Y4P3 447 aaKnown RBP10.06□□□□□ -0.8
PDE4A-207ENST00000590407 PCNX2A6NKB5 2137 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 H0YJW9 148 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 CD33P20138 364 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 GNG10P50151 68 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 RPL8P62917 257 aaKnown RBP10.05□□□□□ -0.8
PDE4A-207ENST00000590407 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
PDE4A-207ENST00000590407 IGFL3Q6UXB1 125 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 LINC00311Q8N616 119 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 CCL13Q99616 98 aa10.05□□□□□ -0.8
PDE4A-207ENST00000590407 NKX6-3A6NJ46 265 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 DIRC3C9JPN6 131 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 APCSP02743 223 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 IRF2P14316 349 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 WT1P19544 449 aaPredicted RBP10.04□□□□□ -0.8
PDE4A-207ENST00000590407 AMTP48728 403 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 PRRX1P54821 245 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
PDE4A-207ENST00000590407 KLF5Q13887 457 aaPredicted RBP10.04□□□□□ -0.8
PDE4A-207ENST00000590407 FAM122AQ96E09 287 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 GRAMD2BQ96HH9 432 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF430Q9H8G1 570 aaPredicted RBP10.04□□□□□ -0.8
PDE4A-207ENST00000590407 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
PDE4A-207ENST00000590407 DLEU1O43261 78 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 OR2J3O76001 311 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
PDE4A-207ENST00000590407 COL8A2P25067 703 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 SUB1P53999 127 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDE4A-207ENST00000590407 BPIFB3P59826 476 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
PDE4A-207ENST00000590407 FXYD3Q14802 87 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 PVRIGQ6DKI7 326 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 PDPNQ86YL7 162 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 ZADH2Q8N4Q0 377 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 DEFB123Q8N688 67 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 FAM216BQ8N7L0 139 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 HARBI1Q96MB7 349 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 MRPL20Q9BYC9 149 aaKnown RBP10.03□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF331Q9NQX6 463 aaPredicted RBP10.03□□□□□ -0.8
PDE4A-207ENST00000590407 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 FAM215AQ9Y5M1 114 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 TCRBV4S1A1TA0A5B7 111 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 PEX7O00628 323 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 FSTL3O95633 263 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
PDE4A-207ENST00000590407 SRIP30626 198 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 MYCNOSP40205 109 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 KRTDAPP60985 99 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 C1orf185Q5T7R7 199 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 ATP5L2Q7Z4Y8 100 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 ZNF329Q86UD4 541 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 NIT1Q86X76 327 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 STXBP6Q8NFX7 210 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 PAXXQ9BUH6 204 aa10.03□□□□□ -0.8
PDE4A-207ENST00000590407 PPP1R14DQ9NXH3 145 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms