RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MISP3Q96FF7 219 aa13.74□□□□□ -0.21
DDX39A-212ENST00000590260 ATP6V0BQ99437 205 aa13.74□□□□□ -0.21
DDX39A-212ENST00000590260 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
DDX39A-212ENST00000590260 CACNG5Q9UF02 275 aa13.74□□□□□ -0.21
DDX39A-212ENST00000590260 ZNF320A2RRD8 509 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 IFNA17P01571 189 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 FRMD6-AS1P0C7T7 363 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 FCGR2BP31994 310 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-212ENST00000590260 AP3S2P59780 193 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 FAM106AQ4KMX7 169 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 NMSQ5H8A3 153 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 SPANXN2Q5MJ10 180 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 LYZL2Q7Z4W2 148 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 OR2K2Q8NGT1 345 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 TMEM190Q8WZ59 177 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 BSCL2Q96G97 398 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-212ENST00000590260 C19orf73Q9NVV2 129 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 NDUFA13Q9P0J0 144 aa13.73□□□□□ -0.21
DDX39A-212ENST00000590260 CYB5BO43169 146 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 IGHV4-30-4P0DP06 118 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 FAUP35544 74 aaKnown RBP13.72□□□□□ -0.21
DDX39A-212ENST00000590260 CCR6P51684 374 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 ERHP84090 104 aaKnown RBP13.72□□□□□ -0.21
DDX39A-212ENST00000590260 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 UBAC2Q8NBM4 344 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 UXS1Q8NBZ7 420 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 OR52E5Q8NH55 327 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 RNASE11Q8TAA1 199 aaKnown RBP13.72□□□□□ -0.21
DDX39A-212ENST00000590260 TMEM170AQ8WVE7 144 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 WDR89Q96FK6 387 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-212ENST00000590260 SCGB3A2Q96PL1 93 aa13.72□□□□□ -0.21
DDX39A-212ENST00000590260 FNDC4Q9H6D8 234 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-212ENST00000590260 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-212ENST00000590260 IGHV3OR16-8A0A075B7F1 116 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 NXPH3O95157 252 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 BTCP35070 178 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 HOXA1P49639 335 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-212ENST00000590260 SPCS3P61009 180 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 MLANAQ16655 118 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-212ENST00000590260 TMEM61Q8N0U2 210 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 DEDD2Q8WXF8 326 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.21
DDX39A-212ENST00000590260 A8MZ25 164 aa13.7□□□□□ -0.22
DDX39A-212ENST00000590260 Q56UQ5 140 aa13.7□□□□□ -0.22
DDX39A-212ENST00000590260 SPSB3Q6PJ21 355 aa13.7□□□□□ -0.22
DDX39A-212ENST00000590260 BTNL8Q6UX41 500 aa13.7□□□□□ -0.22
DDX39A-212ENST00000590260 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
DDX39A-212ENST00000590260 PINX1Q96BK5 328 aaKnown RBP13.7□□□□□ -0.22
DDX39A-212ENST00000590260 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
DDX39A-212ENST00000590260 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 NDUFA4O00483 81 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 CD7P09564 240 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 IL7P13232 177 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 MFAP4P55083 255 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 ELLP55199 621 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-212ENST00000590260 PPP1R1AQ13522 171 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 TMEM128Q5BJH2 165 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 DYNLRB2Q8TF09 96 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 SLC25A21Q9BQT8 299 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-212ENST00000590260 PDCD10Q9BUL8 212 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
DDX39A-212ENST00000590260 SNCAP37840 140 aa13.68□□□□□ -0.22
DDX39A-212ENST00000590260 TXN2Q99757 166 aa13.68□□□□□ -0.22
DDX39A-212ENST00000590260 MRPL27Q9P0M9 148 aaKnown RBP13.68□□□□□ -0.22
DDX39A-212ENST00000590260 FLVCR2Q9UPI3 526 aa13.68□□□□□ -0.22
DDX39A-212ENST00000590260 UFC1Q9Y3C8 167 aa13.68□□□□□ -0.22
DDX39A-212ENST00000590260 LINC00854A0A1B0GVQ3 168 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 A6NHS1 94 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
DDX39A-212ENST00000590260 PITX3O75364 302 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 NHLRC4P0CG21 123 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-212ENST00000590260 SULT1A3P0DMM9 295 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 SULT1A4P0DMN0 295 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 LGI3Q8N145 548 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 LRTM2Q8N967 370 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 HSPB7Q9UBY9 170 aa13.67□□□□□ -0.22
DDX39A-212ENST00000590260 PLA2G10O15496 165 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 NDUFB6O95139 128 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 SFT2D2O95562 160 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 TMEM50AO95807 157 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 RBMS2Q15434 407 aaKnown RBP13.66□□□□□ -0.22
DDX39A-212ENST00000590260 TRIQKQ629K1 86 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-212ENST00000590260 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 NEURL2Q9BR09 285 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 PALMDQ9NP74 551 aa13.66□□□□□ -0.22
DDX39A-212ENST00000590260 DAZ1Q9NQZ3 744 aaKnown RBP13.66□□□□□ -0.22
DDX39A-212ENST00000590260 K7EMT4 169 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
DDX39A-212ENST00000590260 CD81P60033 236 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 SMCO1Q147U7 214 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 GUCA2BQ16661 112 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 C2orf83Q53S99 150 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 CENPSQ8N2Z9 138 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms