RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TM4SF20	Q53R12	229 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	PLET1	Q6UQ28	207 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	LYZL2	Q7Z4W2	148 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	ATP6V0B	Q99437	205 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	SELENOK	Q9Y6D0	94 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	DNAH7	Q8WXX0	4024 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867		A6NHS1	94 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	CYB5B	O43169	146 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	IFNA17	P01571	189 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	CTSG	P08311	255 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	C8orf88	P0DMB2	117 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	CBLN1	P23435	193 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	FCGR2B	P31994	310 aa	Predicted RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	CCR6	P51684	374 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	ERH	P84090	104 aa	Known RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	ANKRD55	Q3KP44	614 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	ZNF57	Q68EA5	555 aa	Predicted RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	OR52E5	Q8NH55	327 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	TMEM170A	Q8WVE7	144 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	MISP3	Q96FF7	219 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	BSCL2	Q96G97	398 aa	Predicted RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	MRPL36	Q9P0J6	103 aa	Known RBP	13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	MLX	Q9UH92	298 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867	SMAD5-AS1	Q9Y6J3	95 aa		13.06	□□□□□ -0.32
MBD1-221	ENST00000589867		A0A0B4J2A0	478 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	SPCS3	P61009	180 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	DCTN2	Q13561	401 aa	Known RBP	13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	FAM106A	Q4KMX7	169 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	TMED4	Q7Z7H5	227 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	TMEM190	Q8WZ59	177 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	SHPK	Q9UHJ6	478 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	KCNIP3	Q9Y2W7	256 aa		13.05	□□□□□ -0.32
MBD1-221	ENST00000589867	ZNF320	A2RRD8	509 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	IL7	P13232	177 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	CD69	Q07108	199 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	MLANA	Q16655	118 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	TMEM128	Q5BJH2	165 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	SPSB3	Q6PJ21	355 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	UXS1	Q8NBZ7	420 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	OR2K2	Q8NGT1	345 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	RNASE11	Q8TAA1	199 aa	Known RBP	13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	ASCL2	Q99929	193 aa		13.04	□□□□□ -0.32
MBD1-221	ENST00000589867	PLA2G10	O15496	165 aa		13.03	□□□□□ -0.32
MBD1-221	ENST00000589867	HOXA1	P49639	335 aa	Predicted RBP	13.03	□□□□□ -0.32
MBD1-221	ENST00000589867	PPP1R1A	Q13522	171 aa		13.03	□□□□□ -0.32
MBD1-221	ENST00000589867		Q56UQ5	140 aa		13.03	□□□□□ -0.32
MBD1-221	ENST00000589867	LRTM2	Q8N967	370 aa		13.03	□□□□□ -0.32
MBD1-221	ENST00000589867	C19orf73	Q9NVV2	129 aa		13.03	□□□□□ -0.32
MBD1-221	ENST00000589867	FLVCR2	Q9UPI3	526 aa		13.03	□□□□□ -0.32
MBD1-221	ENST00000589867	IGHV3OR16-8	A0A075B7F1	116 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	LINC00854	A0A1B0GVQ3	168 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	PITX3	O75364	302 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	NDUFB6	O95139	128 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	NXPH3	O95157	252 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	FRMD6-AS1	P0C7T7	363 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	SULT1A3	P0DMM9	295 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	SULT1A4	P0DMN0	295 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	MFAP4	P55083	255 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	ELL	P55199	621 aa	Predicted RBP	13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	TRIQK	Q629K1	86 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	LCN12	Q6JVE5	192 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	SBSPON	Q8IVN8	264 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	LGI3	Q8N145	548 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	UBAC2	Q8NBM4	344 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	PINX1	Q96BK5	328 aa	Known RBP	13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	WDR89	Q96FK6	387 aa	Predicted RBP	13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	TXN2	Q99757	166 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	PDCD10	Q9BUL8	212 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	NBEAL2	Q6ZNJ1	2754 aa		13.02	□□□□□ -0.33
MBD1-221	ENST00000589867	NDUFA4	O00483	81 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	SFT2D2	O95562	160 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	IGHV4-30-4	P0DP06	118 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	SNCA	P37840	140 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	RBMS2	Q15434	407 aa	Known RBP	13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	CNPY1	Q3B7I2	92 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	TMEM61	Q8N0U2	210 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	DYNLRB2	Q8TF09	96 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	TECR	Q9NZ01	308 aa	Known RBP	13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	HSPB7	Q9UBY9	170 aa		13.01	□□□□□ -0.33
MBD1-221	ENST00000589867	NAP1L6	A6NFF2	107 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867		A8MZ25	164 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	CD7	P09564	240 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	SRPX	P78539	464 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	TNFRSF9	Q07011	255 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	SMCO1	Q147U7	214 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	BTNL8	Q6UX41	500 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	CENPS	Q8N2Z9	138 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	UFC1	Q9Y3C8	167 aa		13	□□□□□ -0.33
MBD1-221	ENST00000589867	ZNF207	O43670	478 aa	Known RBP	12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	TMEM50A	O95807	157 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	ANXA3	P12429	323 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	VAMP1	P23763	118 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	C2orf83	Q53S99	150 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	MARC2	Q969Z3	335 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	OR10C1	Q96KK4	312 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	WFDC10A	Q9H1F0	79 aa		12.99	□□□□□ -0.33
MBD1-221	ENST00000589867	PALMD	Q9NP74	551 aa		12.99	□□□□□ -0.33

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