RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
DNMT1-221ENST00000589538 SHPKQ9UHJ6 478 aa12.51□□□□□ -0.41
DNMT1-221ENST00000589538 K7EIM0 57 aa12.5□□□□□ -0.41
DNMT1-221ENST00000589538 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
DNMT1-221ENST00000589538 MFAP4P55083 255 aa12.5□□□□□ -0.41
DNMT1-221ENST00000589538 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
DNMT1-221ENST00000589538 Q6ZRM9 215 aa12.5□□□□□ -0.41
DNMT1-221ENST00000589538 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
DNMT1-221ENST00000589538 SDHCQ99643 169 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-221ENST00000589538 TECRQ9NZ01 308 aaKnown RBP12.5□□□□□ -0.41
DNMT1-221ENST00000589538 LSM4Q9Y4Z0 139 aaKnown RBP12.5□□□□□ -0.41
DNMT1-221ENST00000589538 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
DNMT1-221ENST00000589538 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 OR2T8A6NH00 312 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 C2orf70A6NJV1 201 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 A8MWP6 167 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 I3L2K1 104 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 IL7P13232 177 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 VAMP1P23763 118 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-221ENST00000589538 CCR6P51684 374 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 ELLP55199 621 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-221ENST00000589538 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 Q56UQ5 140 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 MARC2Q969Z3 335 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 ZNF436Q9C0F3 470 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-221ENST00000589538 UFC1Q9Y3C8 167 aa12.49□□□□□ -0.41
DNMT1-221ENST00000589538 A6NHS1 94 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 NDUFB6O95139 128 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 MT-CO2P00403 227 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 HTR2BP41595 481 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-221ENST00000589538 NMSQ5H8A3 153 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 NOXA1Q86UR1 476 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 S100ZQ8WXG8 99 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
DNMT1-221ENST00000589538 IGHV3-21A0A0B4J1V1 117 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 A0A1B0GU03 582 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 CEBPZOSA8MTT3 80 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 NDUFA4O00483 81 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 NUPL2O15504 423 aaKnown RBP12.47□□□□□ -0.41
DNMT1-221ENST00000589538 SFT2D2O95562 160 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 FOLR2P14207 255 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 CD69Q07108 199 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 LYZL2Q7Z4W2 148 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 HAPLN4Q86UW8 402 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 UBAC2Q8NBM4 344 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
DNMT1-221ENST00000589538 CCDC32Q9BV29 185 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 HIPK2Q9H2X6 1198 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 HEYLQ9NQ87 328 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-221ENST00000589538 ZC4H2Q9NQZ6 224 aa12.47□□□□□ -0.41
DNMT1-221ENST00000589538 SCGB2A1O75556 95 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 RNASE2P10153 161 aaKnown RBP12.46□□□□□ -0.41
DNMT1-221ENST00000589538 CBLN1P23435 193 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 NPBWR1P48145 328 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 PPP1R1AQ13522 171 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 BSXQ3C1V8 233 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 DUSP18Q8NEJ0 188 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 BATF3Q9NR55 127 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 PRR13Q9NZ81 148 aa12.46□□□□□ -0.41
DNMT1-221ENST00000589538 LINC00854A0A1B0GVQ3 168 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 RPS10-NUDT3A0A1W2PQS6 291 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 F8W735 103 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-221ENST00000589538 GNG7O60262 68 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 SLC25A6P12236 298 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 TNFRSF9Q07011 255 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 DEFB114Q30KQ6 69 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 ADAMTSL5Q6ZMM2 481 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 OR1S1Q8NH92 325 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 TMEM190Q8WZ59 177 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 DAZ1Q9NQZ3 744 aaKnown RBP12.45□□□□□ -0.42
DNMT1-221ENST00000589538 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
DNMT1-221ENST00000589538 HSPB7Q9UBY9 170 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 TMED3Q9Y3Q3 217 aa12.45□□□□□ -0.42
DNMT1-221ENST00000589538 CTSGP08311 255 aa12.44□□□□□ -0.42
DNMT1-221ENST00000589538 ANKRD55Q3KP44 614 aa12.44□□□□□ -0.42
DNMT1-221ENST00000589538 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
DNMT1-221ENST00000589538 C2orf83Q53S99 150 aa12.44□□□□□ -0.42
DNMT1-221ENST00000589538 UNQ9165/PRO28630Q6UXU0 137 aa12.44□□□□□ -0.42
DNMT1-221ENST00000589538 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
DNMT1-221ENST00000589538 CHRDL1Q9BU40 450 aa12.44□□□□□ -0.42
DNMT1-221ENST00000589538 PTTG2Q9NZH5 202 aa12.44□□□□□ -0.42
DNMT1-221ENST00000589538 IGHV3-35A0A0C4DH35 117 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 C15orf62A8K5M9 175 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 K7EMT4 169 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 LYRM1O43325 122 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-221ENST00000589538 C8orf88P0DMB2 117 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 BTCP35070 178 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 ADMP35318 185 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 OPRK1P41145 380 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 ATP5IP56385 69 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms