RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 B9D2Q9BPU9 175 aa13.33□□□□□ -0.28
H3F3B-207ENST00000589417 C7orf50Q9BRJ6 194 aaKnown RBP13.33□□□□□ -0.28
H3F3B-207ENST00000589417 DNAH9Q9NYC9 4486 aa13.33□□□□□ -0.28
H3F3B-207ENST00000589417 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
H3F3B-207ENST00000589417 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
H3F3B-207ENST00000589417 RBMS2Q15434 407 aaKnown RBP13.32□□□□□ -0.28
H3F3B-207ENST00000589417 LGI3Q8N145 548 aa13.32□□□□□ -0.28
H3F3B-207ENST00000589417 TECRQ9NZ01 308 aaKnown RBP13.32□□□□□ -0.28
H3F3B-207ENST00000589417 CACNG5Q9UF02 275 aa13.32□□□□□ -0.28
H3F3B-207ENST00000589417 TMEM213A2RRL7 107 aa13.31□□□□□ -0.28
H3F3B-207ENST00000589417 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
H3F3B-207ENST00000589417 RNASE2P10153 161 aaKnown RBP13.31□□□□□ -0.28
H3F3B-207ENST00000589417 FOLR2P14207 255 aa13.31□□□□□ -0.28
H3F3B-207ENST00000589417 SNCAP37840 140 aa13.31□□□□□ -0.28
H3F3B-207ENST00000589417 SUB1P53999 127 aaKnown RBP eCLIP13.31□□□□□ -0.28
H3F3B-207ENST00000589417 UBE2MP61081 183 aaKnown RBP13.31□□□□□ -0.28
H3F3B-207ENST00000589417 CORTO00230 105 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 NDUFB6O95139 128 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 LY86O95711 162 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 MT-CO2P00403 227 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 CTSGP08311 255 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 SULT1A3P0DMM9 295 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 SULT1A4P0DMN0 295 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 IL7P13232 177 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 CBLN1P23435 193 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 ADMP35318 185 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 INPP1P49441 399 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 CCR6P51684 374 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 MFAP4P55083 255 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 DEFB114Q30KQ6 69 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 SPINK9Q5DT21 86 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 LYZL2Q7Z4W2 148 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 HAPLN4Q86UW8 402 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 Q8N1Y9 231 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 MARC2Q969Z3 335 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 PALMDQ9NP74 551 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 ZC4H2Q9NQZ6 224 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 SMAD5-AS1Q9Y6J3 95 aa13.3□□□□□ -0.28
H3F3B-207ENST00000589417 A0A1B0GU03 582 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 A8MZ25 164 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 NDUFA4O00483 81 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 HOXA1P49639 335 aaPredicted RBP13.29□□□□□ -0.28
H3F3B-207ENST00000589417 CNPY1Q3B7I2 92 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 UNQ9165/PRO28630Q6UXU0 137 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 CENPSQ8N2Z9 138 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 TMEM190Q8WZ59 177 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 MISP3Q96FF7 219 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 ZNF414Q96IQ9 312 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 CHRDL1Q9BU40 450 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 ENY2Q9NPA8 101 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 UFC1Q9Y3C8 167 aa13.29□□□□□ -0.28
H3F3B-207ENST00000589417 IGHV3-21A0A0B4J1V1 117 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 ZNF320A2RRD8 509 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 CENPXA8MT69 81 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 K7EMT4 169 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 SFT2D2O95562 160 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 SLC25A6P12236 298 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 BTCP35070 178 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 HTR2BP41595 481 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 SMCO1Q147U7 214 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 CD300EQ496F6 205 aaPredicted RBP13.28□□□□□ -0.28
H3F3B-207ENST00000589417 PRR13Q9NZ81 148 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 MRPL27Q9P0M9 148 aaKnown RBP13.28□□□□□ -0.28
H3F3B-207ENST00000589417 HSPB7Q9UBY9 170 aa13.28□□□□□ -0.28
H3F3B-207ENST00000589417 ZNF785A8K8V0 405 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 PITX3O75364 302 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 NHLRC4P0CG21 123 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-207ENST00000589417 PPP1R1AQ13522 171 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 ANKRD55Q3KP44 614 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 C2orf83Q53S99 150 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 Q56UQ5 140 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 CCDC32Q9BV29 185 aa13.27□□□□□ -0.29
H3F3B-207ENST00000589417 IZUMO1RA6ND01 250 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 PLA2G10O15496 165 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 NUPL2O15504 423 aaKnown RBP13.26□□□□□ -0.29
H3F3B-207ENST00000589417 EDN2P20800 178 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 NPBWR1P48145 328 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 RELQ04864 619 aaPredicted RBP13.26□□□□□ -0.29
H3F3B-207ENST00000589417 TNFRSF9Q07011 255 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 CD69Q07108 199 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 TM4SF20Q53R12 229 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 DUSP18Q8NEJ0 188 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 TMED3Q9Y3Q3 217 aa13.26□□□□□ -0.29
H3F3B-207ENST00000589417 TRAV25A0A0B4J276 109 aa13.25□□□□□ -0.29
H3F3B-207ENST00000589417 C15orf62A8K5M9 175 aa13.25□□□□□ -0.29
H3F3B-207ENST00000589417 VAMP1P23763 118 aa13.25□□□□□ -0.29
H3F3B-207ENST00000589417 ATP5IP56385 69 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-207ENST00000589417 RNASEH2CQ8TDP1 164 aaKnown RBP13.25□□□□□ -0.29
H3F3B-207ENST00000589417 DYNLRB2Q8TF09 96 aa13.25□□□□□ -0.29
H3F3B-207ENST00000589417 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
H3F3B-207ENST00000589417 OR10C1Q96KK4 312 aa13.25□□□□□ -0.29
H3F3B-207ENST00000589417 FNDC4Q9H6D8 234 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-207ENST00000589417 HEYLQ9NQ87 328 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-207ENST00000589417 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
H3F3B-207ENST00000589417 COL7A1Q02388 2944 aa13.24□□□□□ -0.29
H3F3B-207ENST00000589417 IGHV3-35A0A0C4DH35 117 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 607 ms